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The map label for this gene is atoS [C]

Identifier: 156976386

GI number: 156976386

Start: 398544

End: 399938

Strand: Reverse

Name: atoS [C]

Synonym: VIBHAR_05159

Alternate gene names: 156976386

Gene position: 399938-398544 (Counterclockwise)

Preceding gene: 156976396

Following gene: 156976385

Centisome position: 18.15

GC content: 43.66

Gene sequence:

>1395_bases
ATGGATATGTTACTCATCTTCAAAATCTACCTCTTCTATGGCTTAACTTTCTTCGCCATCTTTTTTGCAATTTTGTTTCG
GGATTTACGAAAAAGCCGGATCGCAATTGCTTCTGCTTTACCCATCCTTGCGTTGTTTGGCTTCATACATGGTTTCCATG
AGTGGTCAGAACTTTACTTGGTGATGTATGAACACGAGTTTACCCTGACCAAAGGCGTAGAAACTTTCAAGGTATTCAAA
CTTTTGTTTTCGTTCATTGCTCTCGGTGCTTTTGCATGGAAGATGCTTAGCCTCACTGATTGGAAAAACGTCAAAGCCAT
TAAATACGGAGCCATAGCAGTTATCGCTCTGTTTGCTGCTAGCTTGGTCATCCGCTTTGGTAACAAAGAGTACGCCATTT
ATATTCACGATACTGCGAATCAAGTCCGCTGGATCTTTGGTTTAGGTTCTGGGCTAATTTCAGGATTAGCAATGATGAGT
TACGCAAATATTCTCGAACAAGAAGGTCATGGTGCTTCACTACCCTTTAAACTGATCGGTCTTTCTCTCATTGCATACGG
CATTTCAGCAGGCTTACTTACGGTTGACTTAGGGCTTTGGGTGCTGATCGTGAGAATGGTTTGCGCACTCTCTATTTTGT
GCACCCTTTGGATTGCATTACGCGTATTTGATGATGAGAAAAGCAAGCAGCTCGAAAGCAACATTCAAATCTCTCAACAA
GATGCCAAACTTAAAGAACTTGGTGAACTGACTTCCGCTGTCGCTCATGAAATCAAAACACCGCTTTCCAGCGCTACCAT
GAGTTGTGATTTGTTGGAAAAACAACTGCCCGACAACGAGGTTAGTCACCGTCATCTAGCTCGAATTCGGCAAGGATTAG
AACGGGCTGCTGAAATCAGTCATGAGGTTCTGAACTATGCTCACCATAAACCGATTCAGCGAGAAATCGTTTCACTGCAA
CAGGTCGTTGAACAGGCCCTCTATCTGAACCAATACCGTTTAGAAGGCTTTGCTGTAAGCACATCCCTAGATAATACGCT
TAGTGTCTTAGGTGATGCAGGTCAATTGGAAGAAGTAGTGACCAACATCATTGGCAATGCGATTGACGCTAGCCAAGAAC
ACAAGCAACTCGATATAGAAACGTATCAAGACAAACTGATGGCGATCCTCTCCATTTCCGACTGGGGAACTGGGATGCCA
CTGGACAAAATTGCCAAAGCGAAAACACCGTTCTACACCACAAAACCAAGGGGTGAAGGCACAGGAATGGGATTGGCAAT
CAGTAATCAAATTATATTACAACACGGTGGCGAGCTAAACTTGAGGAACTCGAAGAAGAGTGACCACATTACTGGCTTAA
CGGTTGAGATCCGCTTACCAAGGAACATTGAATGA

Upstream 100 bases:

>100_bases
TCAACCCTGAAAATCGCTTCGAATATACAGGTAACTTTCCATATTAAGATTGCAAATATCCCTTATTGCTTCTGATAAAA
ACGCAATTTAGACTGAAACC

Downstream 100 bases:

>100_bases
CATTAAAACTCTTACTTGCAGAAGACGACACAGAATTGCGAGAGGTTCTCGTTGAAGCATTAACCTTGGAATCGTTTCAA
GTGGTCGCATGTGATAATGC

Product: histidine kinase sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MDMLLIFKIYLFYGLTFFAIFFAILFRDLRKSRIAIASALPILALFGFIHGFHEWSELYLVMYEHEFTLTKGVETFKVFK
LLFSFIALGAFAWKMLSLTDWKNVKAIKYGAIAVIALFAASLVIRFGNKEYAIYIHDTANQVRWIFGLGSGLISGLAMMS
YANILEQEGHGASLPFKLIGLSLIAYGISAGLLTVDLGLWVLIVRMVCALSILCTLWIALRVFDDEKSKQLESNIQISQQ
DAKLKELGELTSAVAHEIKTPLSSATMSCDLLEKQLPDNEVSHRHLARIRQGLERAAEISHEVLNYAHHKPIQREIVSLQ
QVVEQALYLNQYRLEGFAVSTSLDNTLSVLGDAGQLEEVVTNIIGNAIDASQEHKQLDIETYQDKLMAILSISDWGTGMP
LDKIAKAKTPFYTTKPRGEGTGMGLAISNQIILQHGGELNLRNSKKSDHITGLTVEIRLPRNIE

Sequences:

>Translated_464_residues
MDMLLIFKIYLFYGLTFFAIFFAILFRDLRKSRIAIASALPILALFGFIHGFHEWSELYLVMYEHEFTLTKGVETFKVFK
LLFSFIALGAFAWKMLSLTDWKNVKAIKYGAIAVIALFAASLVIRFGNKEYAIYIHDTANQVRWIFGLGSGLISGLAMMS
YANILEQEGHGASLPFKLIGLSLIAYGISAGLLTVDLGLWVLIVRMVCALSILCTLWIALRVFDDEKSKQLESNIQISQQ
DAKLKELGELTSAVAHEIKTPLSSATMSCDLLEKQLPDNEVSHRHLARIRQGLERAAEISHEVLNYAHHKPIQREIVSLQ
QVVEQALYLNQYRLEGFAVSTSLDNTLSVLGDAGQLEEVVTNIIGNAIDASQEHKQLDIETYQDKLMAILSISDWGTGMP
LDKIAKAKTPFYTTKPRGEGTGMGLAISNQIILQHGGELNLRNSKKSDHITGLTVEIRLPRNIE
>Mature_464_residues
MDMLLIFKIYLFYGLTFFAIFFAILFRDLRKSRIAIASALPILALFGFIHGFHEWSELYLVMYEHEFTLTKGVETFKVFK
LLFSFIALGAFAWKMLSLTDWKNVKAIKYGAIAVIALFAASLVIRFGNKEYAIYIHDTANQVRWIFGLGSGLISGLAMMS
YANILEQEGHGASLPFKLIGLSLIAYGISAGLLTVDLGLWVLIVRMVCALSILCTLWIALRVFDDEKSKQLESNIQISQQ
DAKLKELGELTSAVAHEIKTPLSSATMSCDLLEKQLPDNEVSHRHLARIRQGLERAAEISHEVLNYAHHKPIQREIVSLQ
QVVEQALYLNQYRLEGFAVSTSLDNTLSVLGDAGQLEEVVTNIIGNAIDASQEHKQLDIETYQDKLMAILSISDWGTGMP
LDKIAKAKTPFYTTKPRGEGTGMGLAISNQIILQHGGELNLRNSKKSDHITGLTVEIRLPRNIE

Specific function: Member Of The Two-Component Regulatory System Atos/Atoc; May Activate Atoc By Phosphorylation. [C]

COG id: COG4191

COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=228, Percent_Identity=32.4561403508772, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1790436, Length=235, Percent_Identity=28.0851063829787, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001638
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00497 SBP_bac_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 51853; Mature: 51853

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMLLIFKIYLFYGLTFFAIFFAILFRDLRKSRIAIASALPILALFGFIHGFHEWSELYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VMYEHEFTLTKGVETFKVFKLLFSFIALGAFAWKMLSLTDWKNVKAIKYGAIAVIALFAA
EEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SLVIRFGNKEYAIYIHDTANQVRWIFGLGSGLISGLAMMSYANILEQEGHGASLPFKLIG
HHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSLIAYGISAGLLTVDLGLWVLIVRMVCALSILCTLWIALRVFDDEKSKQLESNIQISQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHH
DAKLKELGELTSAVAHEIKTPLSSATMSCDLLEKQLPDNEVSHRHLARIRQGLERAAEIS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HEVLNYAHHKPIQREIVSLQQVVEQALYLNQYRLEGFAVSTSLDNTLSVLGDAGQLEEVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHH
TNIIGNAIDASQEHKQLDIETYQDKLMAILSISDWGTGMPLDKIAKAKTPFYTTKPRGEG
HHHHCCCCCCCHHHHHCCHHHHHHHHHHHHEECCCCCCCCHHHHHHCCCCCEECCCCCCC
TGMGLAISNQIILQHGGELNLRNSKKSDHITGLTVEIRLPRNIE
CCCEEEECCEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MDMLLIFKIYLFYGLTFFAIFFAILFRDLRKSRIAIASALPILALFGFIHGFHEWSELYL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
VMYEHEFTLTKGVETFKVFKLLFSFIALGAFAWKMLSLTDWKNVKAIKYGAIAVIALFAA
EEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
SLVIRFGNKEYAIYIHDTANQVRWIFGLGSGLISGLAMMSYANILEQEGHGASLPFKLIG
HHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LSLIAYGISAGLLTVDLGLWVLIVRMVCALSILCTLWIALRVFDDEKSKQLESNIQISQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHH
DAKLKELGELTSAVAHEIKTPLSSATMSCDLLEKQLPDNEVSHRHLARIRQGLERAAEIS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HEVLNYAHHKPIQREIVSLQQVVEQALYLNQYRLEGFAVSTSLDNTLSVLGDAGQLEEVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHHHHHHH
TNIIGNAIDASQEHKQLDIETYQDKLMAILSISDWGTGMPLDKIAKAKTPFYTTKPRGEG
HHHHCCCCCCCHHHHHCCHHHHHHHHHHHHEECCCCCCCCHHHHHHCCCCCEECCCCCCC
TGMGLAISNQIILQHGGELNLRNSKKSDHITGLTVEIRLPRNIE
CCCEEEECCEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1333793 [H]