| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976372
Identifier: 156976372
GI number: 156976372
Start: 386742
End: 387218
Strand: Reverse
Name: 156976372
Synonym: VIBHAR_05145
Alternate gene names: NA
Gene position: 387218-386742 (Counterclockwise)
Preceding gene: 156976373
Following gene: 156976371
Centisome position: 17.57
GC content: 45.7
Gene sequence:
>477_bases ATGACAACGAATAATCAAAGCCTAAACCTTGAACCTTTAATCCTGCCAAATGCACCAGATTGGTTCCCACTGGCTTGGGG ATGGTGGGCTGTTCTGGGCGGTGTAATTCTCGCCATCTTAATCGTCGTACTGTACTTAAGATGGCGTACAAAGCGTCTTG TGGCCAAGAAGACCGCATTGAAACTGTTGACCAATCCGATCACACCACACACACCGTCTTCTGCATTAGAGGTTCTTCGT CAAGCGGCTTTGAGTTACTTCCCTCGTGAAGAAATCGCGCCATTAACAGGTTCTGCTTGGTACGAGTTTCTTGATAGTTA CACCAAAGAAACTCGATTTGTCGATAAACAACAACAGTGGCAAGCGGCGCTGTATCAAAAATCAGGTCACGAACAGCATC AAGATCTGATTTATGATTGTGCATACTGGATTGCGACCGCATTGCCACCAAAGAAAAAGGCAAAAACTCGTGACTGA
Upstream 100 bases:
>100_bases GCGATTCCATTTAACAGTCTGTCGAGCGGGTTACCGTTGGTTCAGCAGTTAAGCTAATCAAAGCAACAACATACAAATCA TTCAAGCAGTAGTAATAATA
Downstream 100 bases:
>100_bases GGCAACTCTCGTTTCGAGCCTCTCTCAGTGGTTGAACATTGAGTTTGTCTGGTGGTGGGCATTATTGTTACTGCCCCTAC CTTGGCTGATTTATAAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTTNNQSLNLEPLILPNAPDWFPLAWGWWAVLGGVILAILIVVLYLRWRTKRLVAKKTALKLLTNPITPHTPSSALEVLR QAALSYFPREEIAPLTGSAWYEFLDSYTKETRFVDKQQQWQAALYQKSGHEQHQDLIYDCAYWIATALPPKKKAKTRD
Sequences:
>Translated_158_residues MTTNNQSLNLEPLILPNAPDWFPLAWGWWAVLGGVILAILIVVLYLRWRTKRLVAKKTALKLLTNPITPHTPSSALEVLR QAALSYFPREEIAPLTGSAWYEFLDSYTKETRFVDKQQQWQAALYQKSGHEQHQDLIYDCAYWIATALPPKKKAKTRD >Mature_157_residues TTNNQSLNLEPLILPNAPDWFPLAWGWWAVLGGVILAILIVVLYLRWRTKRLVAKKTALKLLTNPITPHTPSSALEVLRQ AALSYFPREEIAPLTGSAWYEFLDSYTKETRFVDKQQQWQAALYQKSGHEQHQDLIYDCAYWIATALPPKKKAKTRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18179; Mature: 18048
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNNQSLNLEPLILPNAPDWFPLAWGWWAVLGGVILAILIVVLYLRWRTKRLVAKKTAL CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLTNPITPHTPSSALEVLRQAALSYFPREEIAPLTGSAWYEFLDSYTKETRFVDKQQQW HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QAALYQKSGHEQHQDLIYDCAYWIATALPPKKKAKTRD HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TTNNQSLNLEPLILPNAPDWFPLAWGWWAVLGGVILAILIVVLYLRWRTKRLVAKKTAL CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLTNPITPHTPSSALEVLRQAALSYFPREEIAPLTGSAWYEFLDSYTKETRFVDKQQQW HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QAALYQKSGHEQHQDLIYDCAYWIATALPPKKKAKTRD HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA