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The map label for this gene is 156976373

Identifier: 156976373

GI number: 156976373

Start: 387262

End: 388188

Strand: Reverse

Name: 156976373

Synonym: VIBHAR_05146

Alternate gene names: NA

Gene position: 388188-387262 (Counterclockwise)

Preceding gene: 156976374

Following gene: 156976372

Centisome position: 17.61

GC content: 48.11

Gene sequence:

>927_bases
ATGTCTGCATCATATGCATTGCCACCTCATGCGAATGGGGTGACATTAACCCTTGAAGAGCTGCTTCAATATCGCACTCA
ATCGGTTCGTTGGCTGCCACCAGCACAGAGTATTTGGTCGCAAATGAGCGGTAACCATACCAGCCGTCAAAAAGGTCGTG
GTGTGGACTTCATGGAAGTACGCCAATACCAAGCGGGTGATGACATTCGCAGCATCGATTGGCGCGTAACGGCTCGAACG
GGAAAAGCGCACACCAAGTTGTTTGCTGAAGACAAAGAGCAAGCGGTGATCTTGTACATCGACTTGAGCCCAAGCATGCA
CTTTGGATCGCAATATGTATTGAAGTCAGTTCAAATGGCACACTTCGCTAGCGTCTTGATTTGGCTGACGTTAGCCAAGA
AAGACCGCATCGGTGCGGTTATAGATGATGGTTCCCAGTGTATTGAGTTCCGCCCTTCTTCGCTTCAAAAGCAAGGGCTG
AGAATTCTTGACGCGATAGTGAATACTCACAATCAATTGCTTACGAATCAACAAGCTGACAGCACACGCACGTTGCCATA
CATGAGCGCAATTGAAACGCTACACAACCTGACGCCGAAAGGCAGTGAGCTTATTCTGCTGAGTGATTTTGCTCAAGTGG
AGGAGAAAGAGCTGATTCAACTGCGTCGATTAAAGCAACACAACAGCGTTCGTGCAGTGCAGTTTTATGATCCTTTAGAG
CGAGGCAAAACCGACTTCCGAGGCCAAGCGAAAGCATCCGATGGTCATCGAAGTCAGTGGTTTAATTTCGGTTCAAAAGG
ACAGCGCCAAGCGTTGGAATCTCATTTCGTTAAGCATCAGCAAGCCATCAAACAGCAGTGTCATTCGATGGCGATTCCAT
TTAACAGTCTGTCGAGCGGGTTACCGTTGGTTCAGCAGTTAAGCTAA

Upstream 100 bases:

>100_bases
TGCTGCTTAGCTACCACGCTCAAGCAGAAGGCATTACAGCAAATCAGGTTATCGACAAGCTTCTTAACCTTGTAGGTAGC
GCATAACGTAGGTAGGTGAC

Downstream 100 bases:

>100_bases
TCAAAGCAACAACATACAAATCATTCAAGCAGTAGTAATAATAATGACAACGAATAATCAAAGCCTAAACCTTGAACCTT
TAATCCTGCCAAATGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSASYALPPHANGVTLTLEELLQYRTQSVRWLPPAQSIWSQMSGNHTSRQKGRGVDFMEVRQYQAGDDIRSIDWRVTART
GKAHTKLFAEDKEQAVILYIDLSPSMHFGSQYVLKSVQMAHFASVLIWLTLAKKDRIGAVIDDGSQCIEFRPSSLQKQGL
RILDAIVNTHNQLLTNQQADSTRTLPYMSAIETLHNLTPKGSELILLSDFAQVEEKELIQLRRLKQHNSVRAVQFYDPLE
RGKTDFRGQAKASDGHRSQWFNFGSKGQRQALESHFVKHQQAIKQQCHSMAIPFNSLSSGLPLVQQLS

Sequences:

>Translated_308_residues
MSASYALPPHANGVTLTLEELLQYRTQSVRWLPPAQSIWSQMSGNHTSRQKGRGVDFMEVRQYQAGDDIRSIDWRVTART
GKAHTKLFAEDKEQAVILYIDLSPSMHFGSQYVLKSVQMAHFASVLIWLTLAKKDRIGAVIDDGSQCIEFRPSSLQKQGL
RILDAIVNTHNQLLTNQQADSTRTLPYMSAIETLHNLTPKGSELILLSDFAQVEEKELIQLRRLKQHNSVRAVQFYDPLE
RGKTDFRGQAKASDGHRSQWFNFGSKGQRQALESHFVKHQQAIKQQCHSMAIPFNSLSSGLPLVQQLS
>Mature_307_residues
SASYALPPHANGVTLTLEELLQYRTQSVRWLPPAQSIWSQMSGNHTSRQKGRGVDFMEVRQYQAGDDIRSIDWRVTARTG
KAHTKLFAEDKEQAVILYIDLSPSMHFGSQYVLKSVQMAHFASVLIWLTLAKKDRIGAVIDDGSQCIEFRPSSLQKQGLR
ILDAIVNTHNQLLTNQQADSTRTLPYMSAIETLHNLTPKGSELILLSDFAQVEEKELIQLRRLKQHNSVRAVQFYDPLER
GKTDFRGQAKASDGHRSQWFNFGSKGQRQALESHFVKHQQAIKQQCHSMAIPFNSLSSGLPLVQQLS

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 34855; Mature: 34724

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASYALPPHANGVTLTLEELLQYRTQSVRWLPPAQSIWSQMSGNHTSRQKGRGVDFMEV
CCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCHHHH
RQYQAGDDIRSIDWRVTARTGKAHTKLFAEDKEQAVILYIDLSPSMHFGSQYVLKSVQMA
HHHHCCCCCEECEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
HFASVLIWLTLAKKDRIGAVIDDGSQCIEFRPSSLQKQGLRILDAIVNTHNQLLTNQQAD
HHHHHHHHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
STRTLPYMSAIETLHNLTPKGSELILLSDFAQVEEKELIQLRRLKQHNSVRAVQFYDPLE
CCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
RGKTDFRGQAKASDGHRSQWFNFGSKGQRQALESHFVKHQQAIKQQCHSMAIPFNSLSSG
CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
LPLVQQLS
CCHHHHCC
>Mature Secondary Structure 
SASYALPPHANGVTLTLEELLQYRTQSVRWLPPAQSIWSQMSGNHTSRQKGRGVDFMEV
CCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCHHHH
RQYQAGDDIRSIDWRVTARTGKAHTKLFAEDKEQAVILYIDLSPSMHFGSQYVLKSVQMA
HHHHCCCCCEECEEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH
HFASVLIWLTLAKKDRIGAVIDDGSQCIEFRPSSLQKQGLRILDAIVNTHNQLLTNQQAD
HHHHHHHHHHHHCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
STRTLPYMSAIETLHNLTPKGSELILLSDFAQVEEKELIQLRRLKQHNSVRAVQFYDPLE
CCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
RGKTDFRGQAKASDGHRSQWFNFGSKGQRQALESHFVKHQQAIKQQCHSMAIPFNSLSSG
CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
LPLVQQLS
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]