Click here to switch to the map view.

The map label for this gene is deoD2 [H]

Identifier: 156976345

GI number: 156976345

Start: 356368

End: 357078

Strand: Reverse

Name: deoD2 [H]

Synonym: VIBHAR_05118

Alternate gene names: 156976345

Gene position: 357078-356368 (Counterclockwise)

Preceding gene: 156976351

Following gene: 156976344

Centisome position: 16.2

GC content: 46.98

Gene sequence:

>711_bases
ATGGCAACCCCACACATTAACGCACAACCAGGTGATTTCGCTGAAACAGTTCTAATGCCAGGCGACCCGTTGCGCGCTAA
ATACATCGCAGAAACGTTCCTAGAAGATGTGACACAAGTTTGTGACGTTCGCAACATGTTCGGCTTTACTGGCACTTACA
AAGGCAAAAAAGTTTCTGTAATGGGCCACGGTATGGGTATCCCATCAGCCTGTATCTACACACACGAGCTAATCGCTGAG
TACGGCGTGAAAAACGTTATCCGTGTAGGTAGCTGTGGTGCAGTACGTGACGACGTGAAACTAATGGACGTTGTTATTGG
CATGGGTGCATCTACAGACTCAAAAGTAAATCGTATCCGTTTCAACAACCACGACTTCGCGGCAATCGCTGACTACGGCC
TTCTAGAAGAAGCGGTAAACCAAGCGCGTGCTCAAGAAGTTCCAGTAAAAGTTGGTAACGTATTCTCTGCAGACCTGTTC
TATACACCAGAAGCAGACATCTTCGAGAGGATGGAAAAACTAGGCATCCTAGGTGTAGATATGGAAGCGGCTGGTATCTA
CGGTGTGGCTGCAGACCTAGGCGCGAAAGCACTAACTATCCTAACGGTCTCTGACCACATCATTCGTGGTGAAAAACTAA
GCTCAGAAGAGCGTCAAAAGTCGTTCAACGACATGATGAAAGTTGCACTAGAAACAGCAATCAACATCTAA

Upstream 100 bases:

>100_bases
CCGATATTATGGCCTCAACGAAAACGAACAAGTTCAACAGAATTGGTAATAGCATCTATAATTGATGCGTTTTACATGAA
CAAAACTTTGGAGAGCACTT

Downstream 100 bases:

>100_bases
GAAATTTCTAAGTAGTAAATTGCAGCCGGAGCCTGACCGGCTGCACGAATTATCCCGAGGGGGCGATTGTGTCTAACGGC
GAACTGCCAAGGGACGCAGA

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP 2 [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MATPHINAQPGDFAETVLMPGDPLRAKYIAETFLEDVTQVCDVRNMFGFTGTYKGKKVSVMGHGMGIPSACIYTHELIAE
YGVKNVIRVGSCGAVRDDVKLMDVVIGMGASTDSKVNRIRFNNHDFAAIADYGLLEEAVNQARAQEVPVKVGNVFSADLF
YTPEADIFERMEKLGILGVDMEAAGIYGVAADLGAKALTILTVSDHIIRGEKLSSEERQKSFNDMMKVALETAINI

Sequences:

>Translated_236_residues
MATPHINAQPGDFAETVLMPGDPLRAKYIAETFLEDVTQVCDVRNMFGFTGTYKGKKVSVMGHGMGIPSACIYTHELIAE
YGVKNVIRVGSCGAVRDDVKLMDVVIGMGASTDSKVNRIRFNNHDFAAIADYGLLEEAVNQARAQEVPVKVGNVFSADLF
YTPEADIFERMEKLGILGVDMEAAGIYGVAADLGAKALTILTVSDHIIRGEKLSSEERQKSFNDMMKVALETAINI
>Mature_235_residues
ATPHINAQPGDFAETVLMPGDPLRAKYIAETFLEDVTQVCDVRNMFGFTGTYKGKKVSVMGHGMGIPSACIYTHELIAEY
GVKNVIRVGSCGAVRDDVKLMDVVIGMGASTDSKVNRIRFNNHDFAAIADYGLLEEAVNQARAQEVPVKVGNVFSADLFY
TPEADIFERMEKLGILGVDMEAAGIYGVAADLGAKALTILTVSDHIIRGEKLSSEERQKSFNDMMKVALETAINI

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=234, Percent_Identity=69.6581196581197, Blast_Score=341, Evalue=3e-95,
Organism=Escherichia coli, GI1790265, Length=234, Percent_Identity=24.7863247863248, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25628; Mature: 25497

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPHINAQPGDFAETVLMPGDPLRAKYIAETFLEDVTQVCDVRNMFGFTGTYKGKKVSV
CCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGHGMGIPSACIYTHELIAEYGVKNVIRVGSCGAVRDDVKLMDVVIGMGASTDSKVNRIR
EECCCCCCHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
FNNHDFAAIADYGLLEEAVNQARAQEVPVKVGNVFSADLFYTPEADIFERMEKLGILGVD
ECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEECEEECCCHHHHHHHHHCCCEECC
MEAAGIYGVAADLGAKALTILTVSDHIIRGEKLSSEERQKSFNDMMKVALETAINI
CHHCCHHHHHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATPHINAQPGDFAETVLMPGDPLRAKYIAETFLEDVTQVCDVRNMFGFTGTYKGKKVSV
CCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGHGMGIPSACIYTHELIAEYGVKNVIRVGSCGAVRDDVKLMDVVIGMGASTDSKVNRIR
EECCCCCCHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEE
FNNHDFAAIADYGLLEEAVNQARAQEVPVKVGNVFSADLFYTPEADIFERMEKLGILGVD
ECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCEEEECEEECCCHHHHHHHHHCCCEECC
MEAAGIYGVAADLGAKALTILTVSDHIIRGEKLSSEERQKSFNDMMKVALETAINI
CHHCCHHHHHHHCCCCEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]