| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
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The map label for this gene is 156976344
Identifier: 156976344
GI number: 156976344
Start: 354830
End: 356299
Strand: Reverse
Name: 156976344
Synonym: VIBHAR_05117
Alternate gene names: NA
Gene position: 356299-354830 (Counterclockwise)
Preceding gene: 156976345
Following gene: 156976343
Centisome position: 16.17
GC content: 47.07
Gene sequence:
>1470_bases GTGTCTAACGGCGAACTGCCAAGGGACGCAGATGGGTTACAACTCAACTTTTGTAAAACATTGGCGTGTGACAACTTTGG ATTGAGTGATGCGAAGCGGTACGTTTTGCAGCATGCTAACCCTAAACGTCCGGCGATGGTATGCCGTGAATGTGGAGCTT TCCCCCCCTTACTTAATAACCGCGATGTAGTGAACGAACTTCATCGTCTGCGTCACGTTCATAGTGACGGGTTACCTGCT TGTCGTAATGATGATTGCGACAACTTCGGACTTTCTGTCCACACGCACAAACACCTCTATCACGCTTTCGGTTACAGTGG CGATCGCCAACGTTACCGCTGTAAAGTGTGTCAAAGTACCTTTGTCGATAAATGGTCTGGTGCCAACAAAAAGCTTCAAT TCCAAGAGAATTTGATGGGCTTATTGTTTACTGGTTATTCCGTTCGAGAAATCTGCCGTAAACTCAGCATCAACCCAAAA ACCTTTTACGACCATGTTGACCATATTGCTAGCCGTTGCCGCCGTAAATTGGCGACGATAGATGCTCGTTGGGTTAACCA TGCAAAGCATTATGAACTGGCATCAAACTACGTCGCCCTGCAACCAAACAGCAACAATGGCGTGTATTGGATTGCTTCGG GTGAAGCGCATTCAGGCTACATTCTGTGTCAGCATGTGAACTACTCTTCTGATGATGAGCCAATCGCTGCTATGGATCAC AACCCATACGATGAGGTGTCTCGTTTCGTTTCGCAAGAATACACTGCAGAAGCAAGCGAACCGCCACCAACGCCATCTAA GAAGCTACGTGAACGCATCGATCAGAAGTACCAAACTATCTTGGCCCGTTGCAACGTAGAAGACCCATTGGGGAACCTTT CTGTCTTCCACTACCCATCAAAAGGCGCATTGATTCGTCCGCCTTACACCTCTTATGCACACTACCTCCATGTGTTGGAT ATGTGTTGCCCTGAAAAGCGTGTTTCTATCTACATGCCTCAAGATCCCCTGCTCCGCTCTGCGGCGTTGAGCGTTTGTTT ATCTCGCATTAAAGAGAAAAGCGTCGATCTGATGTATGTCGAAGAAGACGCGATTTGGGACATGAACGCGCCATTTGGTA AAGTGGATATTGCCTACATGAGTTGGTGGCGTGACCGTTGGGCGATCTCCAGCCAATACGAGTGCAACAAGGGTATCTGT TATTTAGCTGGCGACAGAAATGAGCCGGAATCGTGGTTCAATGTGGCCACAACTCGCCATATCCAATTCTATCAAAATCG TTTTCAACTGCTGTTTGAAAGCTTTATCAACGAGCCACGTCGCAAATTGCGTCCTGCAGGCATATTGCCTCTTTTAGATA TATTCAGAGCTTGGCATAATTTGTGCTATCAGGATAAGCAAGGACTTACTGCTGCTCAAAGGCTCAAAGTCACCGACGCA CCACTCACGATCAAACAATTGTTATCATGA
Upstream 100 bases:
>100_bases AAGTTGCACTAGAAACAGCAATCAACATCTAAGAAATTTCTAAGTAGTAAATTGCAGCCGGAGCCTGACCGGCTGCACGA ATTATCCCGAGGGGGCGATT
Downstream 100 bases:
>100_bases TTATTTAACAGTTTACTCATTTAGAAGTGGTAAATAAGCGCGGAGCGCGGTATACATTACGGAATCCGATACCTTATTGG TGTGGCTGTTTTCTACACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPA CRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPK TFYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLD MCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGIC YLAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA PLTIKQLLS
Sequences:
>Translated_489_residues MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPA CRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPK TFYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLD MCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGIC YLAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA PLTIKQLLS >Mature_488_residues SNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNNRDVVNELHRLRHVHSDGLPAC RNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQSTFVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKT FYDHVDHIASRCRRKLATIDARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDHN PYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPSKGALIRPPYTSYAHYLHVLDM CCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYVEEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICY LAGDRNEPESWFNVATTRHIQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDAP LTIKQLLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56369; Mature: 56237
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNN CCCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC RDVVNELHRLRHVHSDGLPACRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQST HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHH FVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKTFYDHVDHIASRCRRKLATI HHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPS CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC KGALIRPPYTSYAHYLHVLDMCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYV CCCEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE EEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICYLAGDRNEPESWFNVATTRH ECCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH IQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCC PLTIKQLLS CCHHHHHCC >Mature Secondary Structure SNGELPRDADGLQLNFCKTLACDNFGLSDAKRYVLQHANPKRPAMVCRECGAFPPLLNN CCCCCCCCCCCCEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC RDVVNELHRLRHVHSDGLPACRNDDCDNFGLSVHTHKHLYHAFGYSGDRQRYRCKVCQST HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHH FVDKWSGANKKLQFQENLMGLLFTGYSVREICRKLSINPKTFYDHVDHIASRCRRKLATI HHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH DARWVNHAKHYELASNYVALQPNSNNGVYWIASGEAHSGYILCQHVNYSSDDEPIAAMDH HHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC NPYDEVSRFVSQEYTAEASEPPPTPSKKLRERIDQKYQTILARCNVEDPLGNLSVFHYPS CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC KGALIRPPYTSYAHYLHVLDMCCPEKRVSIYMPQDPLLRSAALSVCLSRIKEKSVDLMYV CCCEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE EEDAIWDMNAPFGKVDIAYMSWWRDRWAISSQYECNKGICYLAGDRNEPESWFNVATTRH ECCCEECCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH IQFYQNRFQLLFESFINEPRRKLRPAGILPLLDIFRAWHNLCYQDKQGLTAAQRLKVTDA HHHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCC PLTIKQLLS CCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA