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The map label for this gene is fliP [H]

Identifier: 156976196

GI number: 156976196

Start: 223328

End: 224095

Strand: Reverse

Name: fliP [H]

Synonym: VIBHAR_04967

Alternate gene names: 156976196

Gene position: 224095-223328 (Counterclockwise)

Preceding gene: 156976197

Following gene: 156976195

Centisome position: 10.17

GC content: 50.13

Gene sequence:

>768_bases
ATGAATCTTCTGAGTGACAGTCAGCGTCGGTTGCCGTTAATGGTGATTGCATTACTGGGTTTACTGCTGTTTGCACTGCC
AACCATGGCTGCCGACAATGGCTTAACCATCTTGTCCGTTTCCGACGGGGACACACAGCAAGAGTACAGCGTTAAGCTAC
AAATCCTGTTGCTCATGACAGCACTCAGTTTCTTGCCAGCCTTCATCTTGATGGCCACCAGCTTTACACGCATTATCGTG
GTGTTGGCGATTCTGCGTCAGGCTCTGGGTTTGCAACAAAGCCCGCCAAACCGTGTTTTGGTTGGCATTGCACTGGCATT
AACGTTACTTATTATGCGCCCTGTCTGGACCGATATCCACGACAATGCTTTTAAGCCTTATGACAATGGCGAGATCACCT
TAATGCAGGCGTTTTCGGTGGCCGAAAAGCCGGTGCGAAACTTTATGTTGGCACAAACCCACCAAAGCTCGCTAGAGCAA
ATGTTGCGTATCGCCAACGAGCCCATCGACCAAAACGTGGAAGACATTTCGTTTGCGGTCGTGTTGCCCGCTTTTGTCAT
CAGTGAGCTAAAAACCGCGTTTCAAATCGGCTTCATGTTGTTTATCCCGTTCCTAATCATCGACCTTGTCGTCGCCAGCG
TGTTGATGGCAATGGGTATGATGATGCTGTCACCCCTGATCATTTCGTTGCCATTCAAGCTCGTCGTGTTTGTTCTGGTT
GACGGCTGGGCAATGACGGTCGGCACACTATCCGCCAGCTTTGGGTAG

Upstream 100 bases:

>100_bases
AGAAGTCGTGGTTATTAACGATAAATATGGCTTGCGCCTAATTAATGTGCATGACTCTGCGCTTAGCGGCGTAGGTCGAT
AAATTCAGGTGGGTGGTGCG

Downstream 100 bases:

>100_bases
TGGAGGCGCATCATGACACCGGAACTCACCGTTACCCTATTTTCTGACGCCGTCTGGCTGATCATCTTGATGGTGGCCGT
TTTGGTCGTACCGGGTTTGA

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNLLSDSQRRLPLMVIALLGLLLFALPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMTALSFLPAFILMATSFTRIIV
VLAILRQALGLQQSPPNRVLVGIALALTLLIMRPVWTDIHDNAFKPYDNGEITLMQAFSVAEKPVRNFMLAQTHQSSLEQ
MLRIANEPIDQNVEDISFAVVLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKLVVFVLV
DGWAMTVGTLSASFG

Sequences:

>Translated_255_residues
MNLLSDSQRRLPLMVIALLGLLLFALPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMTALSFLPAFILMATSFTRIIV
VLAILRQALGLQQSPPNRVLVGIALALTLLIMRPVWTDIHDNAFKPYDNGEITLMQAFSVAEKPVRNFMLAQTHQSSLEQ
MLRIANEPIDQNVEDISFAVVLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKLVVFVLV
DGWAMTVGTLSASFG
>Mature_255_residues
MNLLSDSQRRLPLMVIALLGLLLFALPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMTALSFLPAFILMATSFTRIIV
VLAILRQALGLQQSPPNRVLVGIALALTLLIMRPVWTDIHDNAFKPYDNGEITLMQAFSVAEKPVRNFMLAQTHQSSLEQ
MLRIANEPIDQNVEDISFAVVLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKLVVFVLV
DGWAMTVGTLSASFG

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=221, Percent_Identity=51.131221719457, Blast_Score=221, Evalue=3e-59,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28027; Mature: 28027

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLSDSQRRLPLMVIALLGLLLFALPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMT
CCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
ALSFLPAFILMATSFTRIIVVLAILRQALGLQQSPPNRVLVGIALALTLLIMRPVWTDIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DNAFKPYDNGEITLMQAFSVAEKPVRNFMLAQTHQSSLEQMLRIANEPIDQNVEDISFAV
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKLVVFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWAMTVGTLSASFG
CCHHHHHHHHHCCCC
>Mature Secondary Structure
MNLLSDSQRRLPLMVIALLGLLLFALPTMAADNGLTILSVSDGDTQQEYSVKLQILLLMT
CCCCCCCHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
ALSFLPAFILMATSFTRIIVVLAILRQALGLQQSPPNRVLVGIALALTLLIMRPVWTDIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
DNAFKPYDNGEITLMQAFSVAEKPVRNFMLAQTHQSSLEQMLRIANEPIDQNVEDISFAV
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
VLPAFVISELKTAFQIGFMLFIPFLIIDLVVASVLMAMGMMMLSPLIISLPFKLVVFVLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGWAMTVGTLSASFG
CCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]