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The map label for this gene is fliQ [H]

Identifier: 156976195

GI number: 156976195

Start: 223046

End: 223315

Strand: Reverse

Name: fliQ [H]

Synonym: VIBHAR_04966

Alternate gene names: 156976195

Gene position: 223315-223046 (Counterclockwise)

Preceding gene: 156976196

Following gene: 156976194

Centisome position: 10.13

GC content: 47.78

Gene sequence:

>270_bases
ATGACACCGGAACTCACCGTTACCCTATTTTCTGACGCCGTCTGGCTGATCATCTTGATGGTGGCCGTTTTGGTCGTACC
GGGTTTGATTGTTGGCCTGTGTATTGCTGTATTTCAGGCTGCCACGCAAATCAACGAGCAAACCCTAAGCTTCCTGCCAC
GTTTGTTAGTCACGCTGCTGATGGTGATTTTTGCAGGCCATTGGATGCTACGAAAAATCATGGAGCTGTTTGATTTCTTG
TTCCATAACATACCGGGAATGATCGGCTAA

Upstream 100 bases:

>100_bases
CATTTCGTTGCCATTCAAGCTCGTCGTGTTTGTTCTGGTTGACGGCTGGGCAATGACGGTCGGCACACTATCCGCCAGCT
TTGGGTAGTGGAGGCGCATC

Downstream 100 bases:

>100_bases
TGGCGATCACGTTTGCGGAACTGTCTGTGATTCTAGGTCAGCTTTGGTGGCCATTTTTTCGCGTCGGTGCCGTGTTCATT
TCCATGCCATTTTTTGGTGA

Product: flagellar biosynthesis pathway, component FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPELTVTLFSDAVWLIILMVAVLVVPGLIVGLCIAVFQAATQINEQTLSFLPRLLVTLLMVIFAGHWMLRKIMELFDFL
FHNIPGMIG

Sequences:

>Translated_89_residues
MTPELTVTLFSDAVWLIILMVAVLVVPGLIVGLCIAVFQAATQINEQTLSFLPRLLVTLLMVIFAGHWMLRKIMELFDFL
FHNIPGMIG
>Mature_88_residues
TPELTVTLFSDAVWLIILMVAVLVVPGLIVGLCIAVFQAATQINEQTLSFLPRLLVTLLMVIFAGHWMLRKIMELFDFLF
HNIPGMIG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=89, Percent_Identity=40.4494382022472, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9957; Mature: 9826

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPELTVTLFSDAVWLIILMVAVLVVPGLIVGLCIAVFQAATQINEQTLSFLPRLLVTLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVIFAGHWMLRKIMELFDFLFHNIPGMIG
HHHHHCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPELTVTLFSDAVWLIILMVAVLVVPGLIVGLCIAVFQAATQINEQTLSFLPRLLVTLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVIFAGHWMLRKIMELFDFLFHNIPGMIG
HHHHHCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]