| Definition | Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence. |
|---|---|
| Accession | NC_009784 |
| Length | 2,204,018 |
Click here to switch to the map view.
The map label for this gene is insG [H]
Identifier: 156976099
GI number: 156976099
Start: 136832
End: 137992
Strand: Reverse
Name: insG [H]
Synonym: VIBHAR_04870
Alternate gene names: 156976099
Gene position: 137992-136832 (Counterclockwise)
Preceding gene: 156976100
Following gene: 156976097
Centisome position: 6.26
GC content: 43.15
Gene sequence:
>1161_bases ATGTTTGCTCAAGAGTTGGTTTTGGCTCATGAAACGATAGAGGATGGTAAAAACTACGAGTCTGTAGTTAATGCCATTCA ACTTGAATGGATAGAGCAAGCTTTGCTTGATACATCTAAAGCAAGTATTAGGAGGCGACGTTTAGATGAGGCGCCTCTTG CCGCTTTATTTAAAACCTCTGTGGCGGCTTGGGAGAGCGACGCACTAGTAAAAGATAAGGTGCTAGGGCTAAGCATCATG GCCGTGGATGGTACAACTTTTCGTTGTCAAGATTCAGAAGACAATGCGCAAGCATTTGGATTCATTTCTCAAAAACATAA ACCTTACCCTCAACTTCGCTTGGTCGGCCTGATGGCGACCGAGACACGCTTTATGGTGGGGGCTGCATTCGATGCTTGTC AGGTTGGCGAGGTAACGTTAGCACACAGATTATTAGCAGACGTGCCAGCCAACTCGCTTACATTGTTTGATCGTTGCTAC TTTTCCGCCAACTTGTTGATATCGTGGAATGCAGCAGCCTCCAATAGTCACTGGCTAACTCCCGTAAAACGGAAATTAAG ATATGAAGTTGTAGAGCACTTTGCTGAAAACGACATGCTTATTTCTATGCGTATCTCACCACAAGCTCAGCGTAATAACC CTAATTTACCGACTCATTGGCAGGCACGTCTCATCCTCTATAAAGACCCAAAAGGTGAAATTGAAGGCTTTATAACTTCC CTTGTTGACCCTAAGAAGTACTCATTAGAAGATTTATTAGCTGTCTATTGGCAACGCTGGGAAATAGAAGAAGGTTACGG TGAGATAAAGCAAACTCAGCTACAAAGCGAGGTTACCTTGAGAAGTCGTTTTGCTGTTGGTGTTAGACAAGAGCTCTGGG GAATACTGCTAGCGTACAATTTGGTGCGCTTAGAGATGATTCATATTGCTAAAGACGCTGATGTAAGCCCAACTAGAGTT AGCTTTACAGCGGCAATAAACTTAATAGATACCCAGTTACGTTGGTTGGCACTTAGTCCTGATGGAACTCTACCGAGCAA ACTCAAGCAAATGAGGGAAAGCATAAGTCACTTCATTTTACCGGATAAAAGAAAGGACCGAACGTATCCACGTTCAGTCC TTTTTGTCCCTACAAAATATCCATTTAGATATAAGCATTAA
Upstream 100 bases:
>100_bases TAACGGTTACCAATTTACTATAATGCCGATCGGTTTAGAGACTTGAATGATCTTGGGATCGTATGATAATCCCCACTAAC AACGTTAGTGGGGATTTTTT
Downstream 100 bases:
>100_bases TGCTTATCCGAACGGCATTATACCAATTTACTAGGCGTTGTTGATCAGGTCAGCTTTTCAATCCCTCATAGTCCCATTTT CACTGTCTCGTGGTAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MFAQELVLAHETIEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLDEAPLAALFKTSVAAWESDALVKDKVLGLSIM AVDGTTFRCQDSEDNAQAFGFISQKHKPYPQLRLVGLMATETRFMVGAAFDACQVGEVTLAHRLLADVPANSLTLFDRCY FSANLLISWNAAASNSHWLTPVKRKLRYEVVEHFAENDMLISMRISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITS LVDPKKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAKDADVSPTRV SFTAAINLIDTQLRWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH
Sequences:
>Translated_386_residues MFAQELVLAHETIEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLDEAPLAALFKTSVAAWESDALVKDKVLGLSIM AVDGTTFRCQDSEDNAQAFGFISQKHKPYPQLRLVGLMATETRFMVGAAFDACQVGEVTLAHRLLADVPANSLTLFDRCY FSANLLISWNAAASNSHWLTPVKRKLRYEVVEHFAENDMLISMRISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITS LVDPKKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAKDADVSPTRV SFTAAINLIDTQLRWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH >Mature_386_residues MFAQELVLAHETIEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLDEAPLAALFKTSVAAWESDALVKDKVLGLSIM AVDGTTFRCQDSEDNAQAFGFISQKHKPYPQLRLVGLMATETRFMVGAAFDACQVGEVTLAHRLLADVPANSLTLFDRCY FSANLLISWNAAASNSHWLTPVKRKLRYEVVEHFAENDMLISMRISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITS LVDPKKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYNLVRLEMIHIAKDADVSPTRV SFTAAINLIDTQLRWLALSPDGTLPSKLKQMRESISHFILPDKRKDRTYPRSVLFVPTKYPFRYKH
Specific function: Involved in the transposition of the insertion sequence IS4 [H]
COG id: COG3385
COG function: function code L; FOG: Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
Organism=Escherichia coli, GI1790729, Length=340, Percent_Identity=33.2352941176471, Blast_Score=198, Evalue=6e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 - InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 44142; Mature: 44142
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAQELVLAHETIEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLDEAPLAALFKTS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH VAAWESDALVKDKVLGLSIMAVDGTTFRCQDSEDNAQAFGFISQKHKPYPQLRLVGLMAT HHHCCCCCHHHHHHEEEEEEEECCCEEEECCCCCCHHHHEEHHHCCCCCCCEEEEEEEEC ETRFMVGAAFDACQVGEVTLAHRLLADVPANSLTLFDRCYFSANLLISWNAAASNSHWLT CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHEEECEEEEEECCCCCCCCCCC PVKRKLRYEVVEHFAENDMLISMRISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITS HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHH LVDPKKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYN HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLEMIHIAKDADVSPTRVSFTAAINLIDTQLRWLALSPDGTLPSKLKQMRESISHFIL HHHHHHEEEECCCCCCCCEEEEEEEEEHEECCEEEEEECCCCCCHHHHHHHHHHHHHHCC PDKRKDRTYPRSVLFVPTKYPFRYKH CCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MFAQELVLAHETIEDGKNYESVVNAIQLEWIEQALLDTSKASIRRRRLDEAPLAALFKTS CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHH VAAWESDALVKDKVLGLSIMAVDGTTFRCQDSEDNAQAFGFISQKHKPYPQLRLVGLMAT HHHCCCCCHHHHHHEEEEEEEECCCEEEECCCCCCHHHHEEHHHCCCCCCCEEEEEEEEC ETRFMVGAAFDACQVGEVTLAHRLLADVPANSLTLFDRCYFSANLLISWNAAASNSHWLT CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHEEECEEEEEECCCCCCCCCCC PVKRKLRYEVVEHFAENDMLISMRISPQAQRNNPNLPTHWQARLILYKDPKGEIEGFITS HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHH LVDPKKYSLEDLLAVYWQRWEIEEGYGEIKQTQLQSEVTLRSRFAVGVRQELWGILLAYN HCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVRLEMIHIAKDADVSPTRVSFTAAINLIDTQLRWLALSPDGTLPSKLKQMRESISHFIL HHHHHHEEEECCCCCCCCEEEEEEEEEHEECCEEEEEECCCCCCHHHHHHHHHHHHHHCC PDKRKDRTYPRSVLFVPTKYPFRYKH CCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6268937; 7610040; 9278503 [H]