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The map label for this gene is 156976036

Identifier: 156976036

GI number: 156976036

Start: 67842

End: 68150

Strand: Reverse

Name: 156976036

Synonym: VIBHAR_04806

Alternate gene names: NA

Gene position: 68150-67842 (Counterclockwise)

Preceding gene: 156976037

Following gene: 156976033

Centisome position: 3.09

GC content: 46.93

Gene sequence:

>309_bases
TTGCATGTCGAAGGCACATTGGTCGTAGCAGAAAGCGGCCGTGTTAAAGGCGACATCTACGCTAAACAACTGATCGTCAA
TGGCTTGCTGGATGGAAACTGCCATGCAGAACACATTCAAGTGCTAGCAAAGGGCCGAGTCAGTGGCAAAATTTGGAGCA
ACAATCTGAGTATTGAACCGGGTGGTAAGTTCTTCGGAGAAGCCGCAGAACTGCCAGAAAAAGAAGTCGTGACGCTAAAA
GATAAGTCTAATGAAGCGAGAAAGACAGCCGCAAAAACGGACAAGTCATCAGATCGCAAAACTGCATAA

Upstream 100 bases:

>100_bases
TGGCTCATCAGCTTCAACTCTCATCGCCAAAGGCTGTTCTGTTAGCGGAGAACTCAAAGTAGAAAGTGACATACAGGTTG
ATGGCATCATCGAAGGTCAG

Downstream 100 bases:

>100_bases
ATAAAAGTGCTAAATATAGACGAGAAAAAGGGCACGGAATGTGCCCTTTTGGGTTGTTGCTATGCTTGCGCTAGACCAAA
TTAGAATTCGTAGAACAGGC

Product: cell shape determination protein CcmA

Products: NA

Alternate protein names: Cell Shape Determination Protein CcmA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MHVEGTLVVAESGRVKGDIYAKQLIVNGLLDGNCHAEHIQVLAKGRVSGKIWSNNLSIEPGGKFFGEAAELPEKEVVTLK
DKSNEARKTAAKTDKSSDRKTA

Sequences:

>Translated_102_residues
MHVEGTLVVAESGRVKGDIYAKQLIVNGLLDGNCHAEHIQVLAKGRVSGKIWSNNLSIEPGGKFFGEAAELPEKEVVTLK
DKSNEARKTAAKTDKSSDRKTA
>Mature_102_residues
MHVEGTLVVAESGRVKGDIYAKQLIVNGLLDGNCHAEHIQVLAKGRVSGKIWSNNLSIEPGGKFFGEAAELPEKEVVTLK
DKSNEARKTAAKTDKSSDRKTA

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10989; Mature: 10989

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVEGTLVVAESGRVKGDIYAKQLIVNGLLDGNCHAEHIQVLAKGRVSGKIWSNNLSIEP
CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCEECC
GGKFFGEAAELPEKEVVTLKDKSNEARKTAAKTDKSSDRKTA
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MHVEGTLVVAESGRVKGDIYAKQLIVNGLLDGNCHAEHIQVLAKGRVSGKIWSNNLSIEP
CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCEECC
GGKFFGEAAELPEKEVVTLKDKSNEARKTAAKTDKSSDRKTA
CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA