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The map label for this gene is yebA [C]

Identifier: 156976037

GI number: 156976037

Start: 68189

End: 69142

Strand: Reverse

Name: yebA [C]

Synonym: VIBHAR_04807

Alternate gene names: 156976037

Gene position: 69142-68189 (Counterclockwise)

Preceding gene: 156976040

Following gene: 156976036

Centisome position: 3.14

GC content: 48.64

Gene sequence:

>954_bases
ATGAAAGACCAGCTGACTATTTCTATCTCGACCATCAATGGCTCTAAGCATTGGTACTTCAGCAAAGCCATGCAGCGTAA
CTTTAAAACGTGCTTGGCGGTATTCGCCTTGGGGTTAGCAGCGACAGCGATGTTGGTGAATCACCTCTACTCTCAAGTGG
ATGAGGCGGTGCTTGAACAAGCAAAGTTATCCGAGCATTCACGCAATATGGGGCAAGAGTTAAGTCAGCTAAAAACACTG
AAGTCAGAGCTTGAGAACGACCTCTCTGAACGAGAAGAGCGCGTCCAACTTGTTTCTGAACGTTTGGGCGAGTTGGAGAA
AGTACTCGGTGTCGCCAACGAATCCAACACTGAAAGTCTAGATGCGCGCTTTGATACCGCCGCGATCACGTCCAATGTCA
GAATGGTGATGCTAAACCAGATCCCCAGCGGCTCTCCAGTCGGTAAAGCACGCCTTTCATCGGGGTTTGGCAAGCGTATT
CACCCTGTCACCAAGCAGGCCAAGCTGCACCGAGGACTCGACTTTGCAGTTAACACTGGCACCAAAGTATATGCCTCCGC
CGACGGCGTTGTAGAAGCGGCCCGTCGAAGTTACAAAGGTTACGGTAACTTGTTGCGTTTACAGCATTCATTTGGTTTTT
CGAGCGCTTACGCACACTTAAAAGAGTTCAAGGTTAAAGCGGGTGAGTTTGTTAAAAAAGGACAGCTCATCGCCATTTCA
GGCAATACCGGGCTCTCTTCCGGTCCTCACCTTCATTACGAGGTGAGATTTATTGGACGAGCCTTAGATCCGAGGCCATT
CGTGGATTGGCACCTCAATGATTTTGAAGACATTTTTACCAAGGAGCGAAGAATACGATGGGAATCTTTAATCAAAACCG
TGGAACAACGAGTGGCTCATCAGCTTCAACTCTCATCGCCAAAGGCTGTTCTGTTAGCGGAGAACTCAAAGTAG

Upstream 100 bases:

>100_bases
TTCCGTCTATTCCTCCTCTAGAAGACGACGGTGCTTTTACTTACAGTTAGAGCTATCAATAACGAATATCGCACCATTAT
TTATTGCCCTATATATTGCC

Downstream 100 bases:

>100_bases
AAAGTGACATACAGGTTGATGGCATCATCGAAGGTCAGTTGCATGTCGAAGGCACATTGGTCGTAGCAGAAAGCGGCCGT
GTTAAAGGCGACATCTACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKDQLTISISTINGSKHWYFSKAMQRNFKTCLAVFALGLAATAMLVNHLYSQVDEAVLEQAKLSEHSRNMGQELSQLKTL
KSELENDLSEREERVQLVSERLGELEKVLGVANESNTESLDARFDTAAITSNVRMVMLNQIPSGSPVGKARLSSGFGKRI
HPVTKQAKLHRGLDFAVNTGTKVYASADGVVEAARRSYKGYGNLLRLQHSFGFSSAYAHLKEFKVKAGEFVKKGQLIAIS
GNTGLSSGPHLHYEVRFIGRALDPRPFVDWHLNDFEDIFTKERRIRWESLIKTVEQRVAHQLQLSSPKAVLLAENSK

Sequences:

>Translated_317_residues
MKDQLTISISTINGSKHWYFSKAMQRNFKTCLAVFALGLAATAMLVNHLYSQVDEAVLEQAKLSEHSRNMGQELSQLKTL
KSELENDLSEREERVQLVSERLGELEKVLGVANESNTESLDARFDTAAITSNVRMVMLNQIPSGSPVGKARLSSGFGKRI
HPVTKQAKLHRGLDFAVNTGTKVYASADGVVEAARRSYKGYGNLLRLQHSFGFSSAYAHLKEFKVKAGEFVKKGQLIAIS
GNTGLSSGPHLHYEVRFIGRALDPRPFVDWHLNDFEDIFTKERRIRWESLIKTVEQRVAHQLQLSSPKAVLLAENSK
>Mature_317_residues
MKDQLTISISTINGSKHWYFSKAMQRNFKTCLAVFALGLAATAMLVNHLYSQVDEAVLEQAKLSEHSRNMGQELSQLKTL
KSELENDLSEREERVQLVSERLGELEKVLGVANESNTESLDARFDTAAITSNVRMVMLNQIPSGSPVGKARLSSGFGKRI
HPVTKQAKLHRGLDFAVNTGTKVYASADGVVEAARRSYKGYGNLLRLQHSFGFSSAYAHLKEFKVKAGEFVKKGQLIAIS
GNTGLSSGPHLHYEVRFIGRALDPRPFVDWHLNDFEDIFTKERRIRWESLIKTVEQRVAHQLQLSSPKAVLLAENSK

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=45.2173913043478, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789099, Length=95, Percent_Identity=41.0526315789474, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082174, Length=168, Percent_Identity=32.7380952380952, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082297, Length=98, Percent_Identity=34.6938775510204, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 35414; Mature: 35414

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDQLTISISTINGSKHWYFSKAMQRNFKTCLAVFALGLAATAMLVNHLYSQVDEAVLEQ
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLSEHSRNMGQELSQLKTLKSELENDLSEREERVQLVSERLGELEKVLGVANESNTESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DARFDTAAITSNVRMVMLNQIPSGSPVGKARLSSGFGKRIHPVTKQAKLHRGLDFAVNTG
HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEECCC
TKVYASADGVVEAARRSYKGYGNLLRLQHSFGFSSAYAHLKEFKVKAGEFVKKGQLIAIS
CEEEECCCHHHHHHHHHHCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GNTGLSSGPHLHYEVRFIGRALDPRPFVDWHLNDFEDIFTKERRIRWESLIKTVEQRVAH
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQLSSPKAVLLAENSK
HHHCCCCCEEEEECCCC
>Mature Secondary Structure
MKDQLTISISTINGSKHWYFSKAMQRNFKTCLAVFALGLAATAMLVNHLYSQVDEAVLEQ
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLSEHSRNMGQELSQLKTLKSELENDLSEREERVQLVSERLGELEKVLGVANESNTESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
DARFDTAAITSNVRMVMLNQIPSGSPVGKARLSSGFGKRIHPVTKQAKLHRGLDFAVNTG
HHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEECCC
TKVYASADGVVEAARRSYKGYGNLLRLQHSFGFSSAYAHLKEFKVKAGEFVKKGQLIAIS
CEEEECCCHHHHHHHHHHCCCHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GNTGLSSGPHLHYEVRFIGRALDPRPFVDWHLNDFEDIFTKERRIRWESLIKTVEQRVAH
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQLSSPKAVLLAENSK
HHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]