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The map label for this gene is yidA [C]

Identifier: 156938071

GI number: 156938071

Start: 1140375

End: 1141121

Strand: Direct

Name: yidA [C]

Synonym: Igni_1284

Alternate gene names: 156938071

Gene position: 1140375-1141121 (Clockwise)

Preceding gene: 156938070

Following gene: 156938072

Centisome position: 87.89

GC content: 56.89

Gene sequence:

>747_bases
GTGGACTTGTCAGCAATAAAGGTAATAGCAGCGGACGTGGACGGGACCTTAACCGAGGGCGTCTCGTTCTTACTCGATAT
AGACGCAATAAAGGCGTTGAGGGACTTAGAGAGGCACGGGCTGAAAGTGATCTTGGTCTCGGGAAACAGCAGGCCAGTAA
CCTTAACCTTGAAGAGGTACTTGGGGACCAGCGCTCCGGTAGTGTTCGAGAACGGCTGTGGTTACGGGGACTTCACGTGG
GAAGAGACGGTTCCCGACAAGTCCTCTTGCCTCGTGGCGAGGGAAGCGGCAGACACGCTCTTGAAGGTTCTCTCCGTCAA
GGGTTGGAGGCCCTCGTGGCAGAACCCCTGGAGGAAGTGCGACTTCGCGATCAACGCTCCCGAAGGGAAGACCTCCGAAG
AGGACGCCAAGAAGGCTTACAAAATATTGGAAGAGCTGGGTTACTTGAAACAAGGGCTCGCGGTCTTGGTGAGCAGACAC
GCCGTCCACATAATGCCCAAGGACTGTGGCAAGGGTAAAGGAGTCAAGAGGGTAGTGGAGAAGATGGGTTACGACATGAG
CGAAGTGTTGGCAGTTGGCGACGCAGAGAACGATCTAGAGATGATAAAGATGGCCGGCGTGGGCGTGGCGGTCGCGGACG
CCCAAGAGGTGCTCAAGAGGGAAGCCGACATAGTGGCCCCGGAGCCCGCGGGCAAGGGCTTCGCTTGGATAGCGAAGAAG
GTGTTGGAGGCGAAGCGCTCGTCCTAA

Upstream 100 bases:

>100_bases
ACTTAATGGTGTACACCGTCAAGGGCGACTGGAACACCGTTAAATCCCGAGCGTTATCTTTACACGCCCTCTTACCCCAA
ACGCTTGAGGTGGTCAAGAG

Downstream 100 bases:

>100_bases
CTTACTGTACGAAGAGGAAGAGGGGGAGCCCCGGGAGGGCCTCCGAGGTCTACGCGGGGCCCGTAAGGAACTTGTTTGTT
TTGGCCGAAAGGTTGGGCGC

Product: SPP-like hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDLSAIKVIAADVDGTLTEGVSFLLDIDAIKALRDLERHGLKVILVSGNSRPVTLTLKRYLGTSAPVVFENGCGYGDFTW
EETVPDKSSCLVAREAADTLLKVLSVKGWRPSWQNPWRKCDFAINAPEGKTSEEDAKKAYKILEELGYLKQGLAVLVSRH
AVHIMPKDCGKGKGVKRVVEKMGYDMSEVLAVGDAENDLEMIKMAGVGVAVADAQEVLKREADIVAPEPAGKGFAWIAKK
VLEAKRSS

Sequences:

>Translated_248_residues
MDLSAIKVIAADVDGTLTEGVSFLLDIDAIKALRDLERHGLKVILVSGNSRPVTLTLKRYLGTSAPVVFENGCGYGDFTW
EETVPDKSSCLVAREAADTLLKVLSVKGWRPSWQNPWRKCDFAINAPEGKTSEEDAKKAYKILEELGYLKQGLAVLVSRH
AVHIMPKDCGKGKGVKRVVEKMGYDMSEVLAVGDAENDLEMIKMAGVGVAVADAQEVLKREADIVAPEPAGKGFAWIAKK
VLEAKRSS
>Mature_248_residues
MDLSAIKVIAADVDGTLTEGVSFLLDIDAIKALRDLERHGLKVILVSGNSRPVTLTLKRYLGTSAPVVFENGCGYGDFTW
EETVPDKSSCLVAREAADTLLKVLSVKGWRPSWQNPWRKCDFAINAPEGKTSEEDAKKAYKILEELGYLKQGLAVLVSRH
AVHIMPKDCGKGKGVKRVVEKMGYDMSEVLAVGDAENDLEMIKMAGVGVAVADAQEVLKREADIVAPEPAGKGFAWIAKK
VLEAKRSS

Specific function: Catalyzes the dephosphorylation of 2-phosphoglycolate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal SPP-like hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006382
- InterPro:   IPR006378 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 26929; Mature: 26929

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSAIKVIAADVDGTLTEGVSFLLDIDAIKALRDLERHGLKVILVSGNSRPVTLTLKRY
CCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEHHH
LGTSAPVVFENGCGYGDFTWEETVPDKSSCLVAREAADTLLKVLSVKGWRPSWQNPWRKC
HCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
DFAINAPEGKTSEEDAKKAYKILEELGYLKQGLAVLVSRHAVHIMPKDCGKGKGVKRVVE
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
KMGYDMSEVLAVGDAENDLEMIKMAGVGVAVADAQEVLKREADIVAPEPAGKGFAWIAKK
HHCCCHHHHHCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHCCEECCCCCCCCHHHHHHH
VLEAKRSS
HHHHHCCC
>Mature Secondary Structure
MDLSAIKVIAADVDGTLTEGVSFLLDIDAIKALRDLERHGLKVILVSGNSRPVTLTLKRY
CCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEHHH
LGTSAPVVFENGCGYGDFTWEETVPDKSSCLVAREAADTLLKVLSVKGWRPSWQNPWRKC
HCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
DFAINAPEGKTSEEDAKKAYKILEELGYLKQGLAVLVSRHAVHIMPKDCGKGKGVKRVVE
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHH
KMGYDMSEVLAVGDAENDLEMIKMAGVGVAVADAQEVLKREADIVAPEPAGKGFAWIAKK
HHCCCHHHHHCCCCCCCHHHHHHHHCCCEEHHHHHHHHHHHCCEECCCCCCCCHHHHHHH
VLEAKRSS
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA