| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156938070
Identifier: 156938070
GI number: 156938070
Start: 1139812
End: 1140393
Strand: Direct
Name: 156938070
Synonym: Igni_1283
Alternate gene names: NA
Gene position: 1139812-1140393 (Clockwise)
Preceding gene: 156938069
Following gene: 156938071
Centisome position: 87.84
GC content: 57.22
Gene sequence:
>582_bases TTGAAGGGAAGTATGAAGTTAACTTTGTTCACCAAAGACGCCTTGGACTTGACAAAAGTCGTCGGAGAGATGGTCAGAAA GGGGTTCTGGACGGCCAAGGTCGTGCCGGCGGAAGGGGGCTTCGAGATCCTCTCGCCTGAGCCAGGCTTGATAGGGGCCA AGGTCGTTGACGACCAAGTCTCCTACAAGCTGTACGCGAGCAACGAGGGCAGTTCGCTCACCCTCTTTGGCGACTTGGAC AGACCGTTCCTCAAGGTGGCCGAGCTCGTAGGGCTCTTGGCCGCCGGCGGGTGCGGGGAGGAGTGCATAACTGCTGCGGA GCTCACGGCGAGCGTGAGCGCCGAGGGGTTCTGCAGCTTCGGTCAGATAGAGCTGGAGAGGGTAGGGACCCTTTCGGTAT CCGGGCTGGTGGCTAGGAAAGAGGGAGAAGTCGTCAGCGTCGTCCCTTTAAACGAGAACTCGTACTTAATGGTGTACACC GTCAAGGGCGACTGGAACACCGTTAAATCCCGAGCGTTATCTTTACACGCCCTCTTACCCCAAACGCTTGAGGTGGTCAA GAGGTGGACTTGTCAGCAATAA
Upstream 100 bases:
>100_bases TATAAGGATGATCGGGTCCTCGAACTCTGAGCGGTGATGACTGTAGCCCGCGAGTGACTTTCTAAGAGCTCCGGCGCACT CCTCCCGGTGCCCCGAGGGC
Downstream 100 bases:
>100_bases AGGTAATAGCAGCGGACGTGGACGGGACCTTAACCGAGGGCGTCTCGTTCTTACTCGATATAGACGCAATAAAGGCGTTG AGGGACTTAGAGAGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKGSMKLTLFTKDALDLTKVVGEMVRKGFWTAKVVPAEGGFEILSPEPGLIGAKVVDDQVSYKLYASNEGSSLTLFGDLD RPFLKVAELVGLLAAGGCGEECITAAELTASVSAEGFCSFGQIELERVGTLSVSGLVARKEGEVVSVVPLNENSYLMVYT VKGDWNTVKSRALSLHALLPQTLEVVKRWTCQQ
Sequences:
>Translated_193_residues MKGSMKLTLFTKDALDLTKVVGEMVRKGFWTAKVVPAEGGFEILSPEPGLIGAKVVDDQVSYKLYASNEGSSLTLFGDLD RPFLKVAELVGLLAAGGCGEECITAAELTASVSAEGFCSFGQIELERVGTLSVSGLVARKEGEVVSVVPLNENSYLMVYT VKGDWNTVKSRALSLHALLPQTLEVVKRWTCQQ >Mature_193_residues MKGSMKLTLFTKDALDLTKVVGEMVRKGFWTAKVVPAEGGFEILSPEPGLIGAKVVDDQVSYKLYASNEGSSLTLFGDLD RPFLKVAELVGLLAAGGCGEECITAAELTASVSAEGFCSFGQIELERVGTLSVSGLVARKEGEVVSVVPLNENSYLMVYT VKGDWNTVKSRALSLHALLPQTLEVVKRWTCQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20720; Mature: 20720
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGSMKLTLFTKDALDLTKVVGEMVRKGFWTAKVVPAEGGFEILSPEPGLIGAKVVDDQV CCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEEEECCCE SYKLYASNEGSSLTLFGDLDRPFLKVAELVGLLAAGGCGEECITAAELTASVSAEGFCSF EEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC GQIELERVGTLSVSGLVARKEGEVVSVVPLNENSYLMVYTVKGDWNTVKSRALSLHALLP CEEEEEECCEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH QTLEVVKRWTCQQ HHHHHHHHHCCCC >Mature Secondary Structure MKGSMKLTLFTKDALDLTKVVGEMVRKGFWTAKVVPAEGGFEILSPEPGLIGAKVVDDQV CCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCEEEEEEECCCE SYKLYASNEGSSLTLFGDLDRPFLKVAELVGLLAAGGCGEECITAAELTASVSAEGFCSF EEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC GQIELERVGTLSVSGLVARKEGEVVSVVPLNENSYLMVYTVKGDWNTVKSRALSLHALLP CEEEEEECCEEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH QTLEVVKRWTCQQ HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA