| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937988
Identifier: 156937988
GI number: 156937988
Start: 1070489
End: 1072843
Strand: Reverse
Name: 156937988
Synonym: Igni_1201
Alternate gene names: NA
Gene position: 1072843-1070489 (Counterclockwise)
Preceding gene: 156937989
Following gene: 156937987
Centisome position: 82.68
GC content: 56.82
Gene sequence:
>2355_bases TTGAGGAAGCTCGCAGCTCTGTTGGCGCTGTCCGTCGCCTTGGCCTTTGCCTTACCCGGCGCCAAGGCAGACTTGGAGGT GTTCAAGAGCTACGTCAACGAGGCCACCGCAGTGCAAGACGTGCTGAACGGCAAACTGGACATGTACTTCTGGTTCGTGC CATCTCACATGATACCTAAGGTCGCCAACAACCCCAACGTCAAGTATTACTTAGCCTCCGGGGGGTTGGACGACATACTG GTCAACCCGTGCCCGACCCAAGAGCACGGCGGTCCCTTCAACCCCTTCAGCATCAAAGAGGTTAGGTACGCCCTCAACTA CTTGATAGACAGGCAAAAGGTGGTCAGCCAAGTCTTGAACGGCTACGGCTTCGCTATAATATCCCCGCTGACGCCCGTCA ACCCGGACTACCTAACCGCGATAAAGACCTTAGCGCAGTTCAACTTCCAGTATGACTTCGAGAAGGCCAAGAAGATGATA GAAGATGCATTAACTAAGGCCGGAGCTGTGATGAAGGCCGGCAAGTGGTACTACAACGACGAGCCTATAGTGATAAAGTT CATGATAAGGAACGACGACCCCGTGAGGAAGCAGATAGGCGACATGTTGGCCGACGAGCTGGAGAAGCTGGGCTTCGAGG TGGAGAGGATCTACGGCGACTTCAAGAAGGCTCTGCAGCTAGTGTACATGAGCGACCCCGCTAAGGGCGAGTGGCACTTG TATACCGAGGGCTGGGGCAGCTCCTCCATGACCAAGTACTCCGACTCCACGGTCTACCAGATGTACGCCCCCTTCTTCGG CTACATGCCGGGCTGGCAAACCCCGGGCTTCTGCAACTACGAAAACAAGGAGATAGACGAGGTAGCCCTAAAGCTGGCCA ACGGCGACTACGCCAATAAGGCGGAGAGGGACGAACTCCTCAACGATCTAGTCAGGATGGGCATTGAAGAATCTGTCAGG ATATTCGTAGTCAGCCCGATAAACGCTTACATAACCAACGCTAAGGTTAAGAACGTAGTGGACGACCTCTTGACCGGCAT CTCCAACCGCTGGACGGAGATGATGGCCTACAAGCCCGGCTCTCCCAAGCTCACTGTGGGCGTCAAGTACGTCCACAAGT GGGCTTGGAACCCGGTCGGGGGCTACCAAGACCTCTACAGCGTCATAATACACCAGGGTATGGTTGACGACTTCATGACT AACAACCCCTACAACGGCGAGAAGATACCCCTCTTAGCTAAGTCTTGGAGCGTCAAGACCGGCAACATAGCCGTACCCCC CGACGCGGTAACTTACGACTACAAGGAGCACAAGTGGGTCCACGTGAAGCCCGGAACCACCGCGAAGGCCATGATAGTGC TCAACTTGCGCGACAACTTGGGCGCGTTCCACGACGGTCAGAAGGTCAGGCTAACCGACATGCTGTATTGGGTCTACTTG GTAATGGAGTGGGGCACCAAGTCTGGTGAGGACGACGTTAGATACGACCCCTACGTCGCCAGCGTGAACGGTCCTTGGAT ACAGAACTTCAAGGGCGTGCAAGTAGTCAGCCCCAACACCATAGTTATATACAGCGACATGATGCACTTCGACCCAGACG AGCTGGCCTACACCGTAGCGGCGGTGCTCGCTCCATCCACGCCTTGGGAGCTGCTCTACGCCATGGAGCAAGCCGTGGAA GACGGCAAGGTAGCCTTCAGCTCCACCGCCGCTCAGAGCAAGGGAGTGGACTGGTTAGACCTACTGAACCCGGAGCACGT CAAGATAGTTAAGGAGTACTTAGAGAAGGACGCCTCCGAGGGGGTCGTGCCGCCCCAAGTGGGCCAGCTCGAGGACCTCT TGGGCATAAAGGTCACGCCTAACTACGAGGCCGTCGTCAAGTTCATCGAGAAGCACGGCCACGCGGTCATAGGCAACGGG CCCTTGTACCTCGACCGCTACTACCCGAGCAGCGACTCCGCGGTGCTCAAGGCCTTCCGCAACCCCAACTACCCGTTCAG TGCCAAGAACTTCAGCTACCTAGCTTACGAGAACGTCAAGTTCGCCCAAGTGAAGAAGGTTGAGGTCGCCCCGGTGGCCG TCAAGGGTCAAGAGCAAGAGGTGAAGGTGTACGTGGTTGACAAGAACAAGGGAGAGCCCCTGGAGAACGCTATAGTGTTC GTCGCGATATACGACCCCAAGGGCGGGCTGGTGAGCTCCGGCTTCGCCTCCTCCGAGGGCGACGGCGAGTTCGCGTACTC CTTCACGGTGCCGGAGGAGGCCGAGCTGGGCAGCTACACGGTCAAGGTGATAGCTTACAGCGAGGAGGCCTTCTGGCCTT CAATAGCCACCACCACCTTCCTGGTCGTCGGCTAA
Upstream 100 bases:
>100_bases GAGAGCATTAAAGTAATAGAGAAACGCAAGTCACAGATTTAGATCTCGGACTATAGACGCTTATCTACTCTCCCTCGGGG GCAGAACTGAAGGTGGGCCC
Downstream 100 bases:
>100_bases AACCCCCCTTTTTTCCGCCCGTAAAGGGCACAACTCTTGGAAAGGGCAATTTACGTGGGTGACGTGTTCCTCTTACACAA GACCCCTCCCGGGCACCCGG
Product: solute binding protein-like protein
Products: NA
Alternate protein names: Lipoprotein; ABC-Type Dipeptide/Oligopeptide Transport System; Peptide ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MRKLAALLALSVALAFALPGAKADLEVFKSYVNEATAVQDVLNGKLDMYFWFVPSHMIPKVANNPNVKYYLASGGLDDIL VNPCPTQEHGGPFNPFSIKEVRYALNYLIDRQKVVSQVLNGYGFAIISPLTPVNPDYLTAIKTLAQFNFQYDFEKAKKMI EDALTKAGAVMKAGKWYYNDEPIVIKFMIRNDDPVRKQIGDMLADELEKLGFEVERIYGDFKKALQLVYMSDPAKGEWHL YTEGWGSSSMTKYSDSTVYQMYAPFFGYMPGWQTPGFCNYENKEIDEVALKLANGDYANKAERDELLNDLVRMGIEESVR IFVVSPINAYITNAKVKNVVDDLLTGISNRWTEMMAYKPGSPKLTVGVKYVHKWAWNPVGGYQDLYSVIIHQGMVDDFMT NNPYNGEKIPLLAKSWSVKTGNIAVPPDAVTYDYKEHKWVHVKPGTTAKAMIVLNLRDNLGAFHDGQKVRLTDMLYWVYL VMEWGTKSGEDDVRYDPYVASVNGPWIQNFKGVQVVSPNTIVIYSDMMHFDPDELAYTVAAVLAPSTPWELLYAMEQAVE DGKVAFSSTAAQSKGVDWLDLLNPEHVKIVKEYLEKDASEGVVPPQVGQLEDLLGIKVTPNYEAVVKFIEKHGHAVIGNG PLYLDRYYPSSDSAVLKAFRNPNYPFSAKNFSYLAYENVKFAQVKKVEVAPVAVKGQEQEVKVYVVDKNKGEPLENAIVF VAIYDPKGGLVSSGFASSEGDGEFAYSFTVPEEAELGSYTVKVIAYSEEAFWPSIATTTFLVVG
Sequences:
>Translated_784_residues MRKLAALLALSVALAFALPGAKADLEVFKSYVNEATAVQDVLNGKLDMYFWFVPSHMIPKVANNPNVKYYLASGGLDDIL VNPCPTQEHGGPFNPFSIKEVRYALNYLIDRQKVVSQVLNGYGFAIISPLTPVNPDYLTAIKTLAQFNFQYDFEKAKKMI EDALTKAGAVMKAGKWYYNDEPIVIKFMIRNDDPVRKQIGDMLADELEKLGFEVERIYGDFKKALQLVYMSDPAKGEWHL YTEGWGSSSMTKYSDSTVYQMYAPFFGYMPGWQTPGFCNYENKEIDEVALKLANGDYANKAERDELLNDLVRMGIEESVR IFVVSPINAYITNAKVKNVVDDLLTGISNRWTEMMAYKPGSPKLTVGVKYVHKWAWNPVGGYQDLYSVIIHQGMVDDFMT NNPYNGEKIPLLAKSWSVKTGNIAVPPDAVTYDYKEHKWVHVKPGTTAKAMIVLNLRDNLGAFHDGQKVRLTDMLYWVYL VMEWGTKSGEDDVRYDPYVASVNGPWIQNFKGVQVVSPNTIVIYSDMMHFDPDELAYTVAAVLAPSTPWELLYAMEQAVE DGKVAFSSTAAQSKGVDWLDLLNPEHVKIVKEYLEKDASEGVVPPQVGQLEDLLGIKVTPNYEAVVKFIEKHGHAVIGNG PLYLDRYYPSSDSAVLKAFRNPNYPFSAKNFSYLAYENVKFAQVKKVEVAPVAVKGQEQEVKVYVVDKNKGEPLENAIVF VAIYDPKGGLVSSGFASSEGDGEFAYSFTVPEEAELGSYTVKVIAYSEEAFWPSIATTTFLVVG >Mature_784_residues MRKLAALLALSVALAFALPGAKADLEVFKSYVNEATAVQDVLNGKLDMYFWFVPSHMIPKVANNPNVKYYLASGGLDDIL VNPCPTQEHGGPFNPFSIKEVRYALNYLIDRQKVVSQVLNGYGFAIISPLTPVNPDYLTAIKTLAQFNFQYDFEKAKKMI EDALTKAGAVMKAGKWYYNDEPIVIKFMIRNDDPVRKQIGDMLADELEKLGFEVERIYGDFKKALQLVYMSDPAKGEWHL YTEGWGSSSMTKYSDSTVYQMYAPFFGYMPGWQTPGFCNYENKEIDEVALKLANGDYANKAERDELLNDLVRMGIEESVR IFVVSPINAYITNAKVKNVVDDLLTGISNRWTEMMAYKPGSPKLTVGVKYVHKWAWNPVGGYQDLYSVIIHQGMVDDFMT NNPYNGEKIPLLAKSWSVKTGNIAVPPDAVTYDYKEHKWVHVKPGTTAKAMIVLNLRDNLGAFHDGQKVRLTDMLYWVYL VMEWGTKSGEDDVRYDPYVASVNGPWIQNFKGVQVVSPNTIVIYSDMMHFDPDELAYTVAAVLAPSTPWELLYAMEQAVE DGKVAFSSTAAQSKGVDWLDLLNPEHVKIVKEYLEKDASEGVVPPQVGQLEDLLGIKVTPNYEAVVKFIEKHGHAVIGNG PLYLDRYYPSSDSAVLKAFRNPNYPFSAKNFSYLAYENVKFAQVKKVEVAPVAVKGQEQEVKVYVVDKNKGEPLENAIVF VAIYDPKGGLVSSGFASSEGDGEFAYSFTVPEEAELGSYTVKVIAYSEEAFWPSIATTTFLVVG
Specific function: Unknown
COG id: COG3889
COG function: function code R; Predicted solute binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87731; Mature: 87731
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLAALLALSVALAFALPGAKADLEVFKSYVNEATAVQDVLNGKLDMYFWFVPSHMIPK CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC VANNPNVKYYLASGGLDDILVNPCPTQEHGGPFNPFSIKEVRYALNYLIDRQKVVSQVLN CCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GYGFAIISPLTPVNPDYLTAIKTLAQFNFQYDFEKAKKMIEDALTKAGAVMKAGKWYYND CCCEEEECCCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCHHHCCCCEEECC EPIVIKFMIRNDDPVRKQIGDMLADELEKLGFEVERIYGDFKKALQLVYMSDPAKGEWHL CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCEEE YTEGWGSSSMTKYSDSTVYQMYAPFFGYMPGWQTPGFCNYENKEIDEVALKLANGDYANK EECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH AERDELLNDLVRMGIEESVRIFVVSPINAYITNAKVKNVVDDLLTGISNRWTEMMAYKPG HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC SPKLTVGVKYVHKWAWNPVGGYQDLYSVIIHQGMVDDFMTNNPYNGEKIPLLAKSWSVKT CCEEEEEHEEHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCC GNIAVPPDAVTYDYKEHKWVHVKPGTTAKAMIVLNLRDNLGAFHDGQKVRLTDMLYWVYL CCEECCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHH VMEWGTKSGEDDVRYDPYVASVNGPWIQNFKGVQVVSPNTIVIYSDMMHFDPDELAYTVA HHHCCCCCCCCCCCCCCEEEECCCCHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHH AVLAPSTPWELLYAMEQAVEDGKVAFSSTAAQSKGVDWLDLLNPEHVKIVKEYLEKDASE HHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCC GVVPPQVGQLEDLLGIKVTPNYEAVVKFIEKHGHAVIGNGPLYLDRYYPSSDSAVLKAFR CCCCCCCCCHHHHHCEEECCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHC NPNYPFSAKNFSYLAYENVKFAQVKKVEVAPVAVKGQEQEVKVYVVDKNKGEPLENAIVF CCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEE VAIYDPKGGLVSSGFASSEGDGEFAYSFTVPEEAELGSYTVKVIAYSEEAFWPSIATTTF EEEECCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEE LVVG EEEC >Mature Secondary Structure MRKLAALLALSVALAFALPGAKADLEVFKSYVNEATAVQDVLNGKLDMYFWFVPSHMIPK CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC VANNPNVKYYLASGGLDDILVNPCPTQEHGGPFNPFSIKEVRYALNYLIDRQKVVSQVLN CCCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC GYGFAIISPLTPVNPDYLTAIKTLAQFNFQYDFEKAKKMIEDALTKAGAVMKAGKWYYND CCCEEEECCCCCCCCHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCHHHCCCCEEECC EPIVIKFMIRNDDPVRKQIGDMLADELEKLGFEVERIYGDFKKALQLVYMSDPAKGEWHL CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCEEE YTEGWGSSSMTKYSDSTVYQMYAPFFGYMPGWQTPGFCNYENKEIDEVALKLANGDYANK EECCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCH AERDELLNDLVRMGIEESVRIFVVSPINAYITNAKVKNVVDDLLTGISNRWTEMMAYKPG HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCC SPKLTVGVKYVHKWAWNPVGGYQDLYSVIIHQGMVDDFMTNNPYNGEKIPLLAKSWSVKT CCEEEEEHEEHHHHCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEEECCCCCC GNIAVPPDAVTYDYKEHKWVHVKPGTTAKAMIVLNLRDNLGAFHDGQKVRLTDMLYWVYL CCEECCCCCEEECCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHH VMEWGTKSGEDDVRYDPYVASVNGPWIQNFKGVQVVSPNTIVIYSDMMHFDPDELAYTVA HHHCCCCCCCCCCCCCCEEEECCCCHHCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHH AVLAPSTPWELLYAMEQAVEDGKVAFSSTAAQSKGVDWLDLLNPEHVKIVKEYLEKDASE HHHCCCCHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCC GVVPPQVGQLEDLLGIKVTPNYEAVVKFIEKHGHAVIGNGPLYLDRYYPSSDSAVLKAFR CCCCCCCCCHHHHHCEEECCCHHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHHHC NPNYPFSAKNFSYLAYENVKFAQVKKVEVAPVAVKGQEQEVKVYVVDKNKGEPLENAIVF CCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEE VAIYDPKGGLVSSGFASSEGDGEFAYSFTVPEEAELGSYTVKVIAYSEEAFWPSIATTTF EEEECCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEE LVVG EEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA