Definition Ignicoccus hospitalis KIN4/I chromosome, complete genome.
Accession NC_009776
Length 1,297,538

Click here to switch to the map view.

The map label for this gene is 156937931

Identifier: 156937931

GI number: 156937931

Start: 1020350

End: 1022005

Strand: Reverse

Name: 156937931

Synonym: Igni_1143

Alternate gene names: NA

Gene position: 1022005-1020350 (Counterclockwise)

Preceding gene: 156937938

Following gene: 156937929

Centisome position: 78.76

GC content: 58.88

Gene sequence:

>1656_bases
GTGGCCCTAGCTCGAGAGCGCGGAATTAGATTATCTTTGTTAACGCCGAAGAGGGGGCCCGCTGGGTACGCGGCTTTGAG
CAGGAGCGAGGGGCTTAGCTTAGCGCTGCTCCTACTAGGAACCTTAATGCTGGCCTACCCCGCCTTGACTTACTCGCCCC
CGGCGGGCTACTGGGGCTACGCCCCGGCGGTGGTGGGCTCTACCTCCGGCGCGCTCTCGAACTTGAGCGTCCGGACGCTG
CCGGGGGAGGGTAGGTACTACGTCGGAGGGGCCTTGTTGGGCTACGACTTCCAAGGCTCTATGGGAGGGGCCGCAGTAGC
GGCGGCCATAGTGGCCGGCAAGCCGCTAACGAGCTTTGACTACCTCTACTACCTAGAGGACTTGGGCTACAACATTACCT
TTAGGGCCGCTGGCCCCAGCGGGAGCGCGCTGGCCTCCACCTTAACCCTCTTGAGCTTACTCAACTTAAGGGCTGTCAAC
CACCCGGCCATGACCGGAATGATAGGCCTCGGCGGCGAAGTGTTGGTGGTTGGAGGAGTAAACGTAAAGGCTAAGGCCGT
CAAGAGCTACGGCATAGACACGTTCTTGGTGCCCGTGGGCGAGGCGGTGCCCGTTAAGGGCCTCAAGGTAATCACCGTGG
AGAGCATAATAGACGCGGCGAAGTACTTCACCAACCAGAACGTCACGGCCGCCTTGGGGGAGGTCTGCAACCCTCCGGAG
GAGCTGAAGAAGCTTAACGTGTTCGAGAGCCACTACAAGAAGCTCTACGATATGACTGTAGAGCTGATGAAAAAGTACAA
TATAAATAGCACCGAAATAACGAAGAACTTGAAGTTCGCTAGGTGGGCGGCGGAGGAGGGCAACTACTACGCCGCGGCGA
GCTACGCCTTCACCGCCTTGATAAACGCCTACACGATTTACTATAACAGGCTTCTCAACGTAAGTTCAATAGATAAGGCA
AAAGATGTAATAAAGACTGAAGTGGACGGGTTGAAGAGGTACGCCGAGCTGGAGCCCTCCGGCTGCGGGGCCAACTACTG
GAGCGCTGAAGCTTGCGCAGCCGTGTACAACAGGGAGTTCAGGCTCAAAGAGATGATAAAGTTCTTGGAGGCCCACGCGA
ACTTCACCGCCCCCCAGTCGCTATCCTCCGTGGCTTCCACGCTAGCTAGGGCCAAGGCGAGGGCAGTGAGCGTGGAGCTC
TGGGCCTCCGCGGTGGAGGAGCTCGCCCAAGTGCCCTACGCCCCTCCGATTAGGGACTTGCACGCCTTGGCGAGGGAGGC
CTACGCCCTCGGGCTGGCCGCTGCGAGGTACGCCTTGAGCGTGGTTCCCCCGGGTAACGCGCTAACCAACCAGATCGAGG
ACTCCGTCGACGAGATGGCTAAGGCCATGTTTGACGGAAACTTCTTCAAGGTGATAGGGCTTTCATCCTTCGCCTTCGAG
AACTCTGCAGACGCCTTGGGCAGTATACAGAACAGCACGGTGGTTGCCAAAGAGGTGATGCCCTTGGTCGTGGGGAGGAG
CTACTGTAGGACTCCCTCCTTCATTGCTTACAACTACTCCCAGTACGTGGGCAGCTTGCTGAGGACCGACCCCGTGGCGG
CGGAGTTCTTGGCCTACACGGCCTTGTACTACGCCCACCTGGCGGAGCTCAACTGA

Upstream 100 bases:

>100_bases
ATGTAGATTGTTACCAAGTCCAGCAGCCCGGCGTAGCCGAAAGCCAAGAGCACGGAGACGAGCGCTATTATGATTAGGAG
CTCGCCGCCGATCATCGACT

Downstream 100 bases:

>100_bases
GGGGCTTCGCCCGGTAGATTCCCCTCTTAGGCTTTTCCACCAACCCGTTTTTCTCCAACCTCTCAAGGGCGCTCCACAAG
GTCTTCTTGTTAACTCCGAG

Product: serine protease-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MALARERGIRLSLLTPKRGPAGYAALSRSEGLSLALLLLGTLMLAYPALTYSPPAGYWGYAPAVVGSTSGALSNLSVRTL
PGEGRYYVGGALLGYDFQGSMGGAAVAAAIVAGKPLTSFDYLYYLEDLGYNITFRAAGPSGSALASTLTLLSLLNLRAVN
HPAMTGMIGLGGEVLVVGGVNVKAKAVKSYGIDTFLVPVGEAVPVKGLKVITVESIIDAAKYFTNQNVTAALGEVCNPPE
ELKKLNVFESHYKKLYDMTVELMKKYNINSTEITKNLKFARWAAEEGNYYAAASYAFTALINAYTIYYNRLLNVSSIDKA
KDVIKTEVDGLKRYAELEPSGCGANYWSAEACAAVYNREFRLKEMIKFLEAHANFTAPQSLSSVASTLARAKARAVSVEL
WASAVEELAQVPYAPPIRDLHALAREAYALGLAAARYALSVVPPGNALTNQIEDSVDEMAKAMFDGNFFKVIGLSSFAFE
NSADALGSIQNSTVVAKEVMPLVVGRSYCRTPSFIAYNYSQYVGSLLRTDPVAAEFLAYTALYYAHLAELN

Sequences:

>Translated_551_residues
MALARERGIRLSLLTPKRGPAGYAALSRSEGLSLALLLLGTLMLAYPALTYSPPAGYWGYAPAVVGSTSGALSNLSVRTL
PGEGRYYVGGALLGYDFQGSMGGAAVAAAIVAGKPLTSFDYLYYLEDLGYNITFRAAGPSGSALASTLTLLSLLNLRAVN
HPAMTGMIGLGGEVLVVGGVNVKAKAVKSYGIDTFLVPVGEAVPVKGLKVITVESIIDAAKYFTNQNVTAALGEVCNPPE
ELKKLNVFESHYKKLYDMTVELMKKYNINSTEITKNLKFARWAAEEGNYYAAASYAFTALINAYTIYYNRLLNVSSIDKA
KDVIKTEVDGLKRYAELEPSGCGANYWSAEACAAVYNREFRLKEMIKFLEAHANFTAPQSLSSVASTLARAKARAVSVEL
WASAVEELAQVPYAPPIRDLHALAREAYALGLAAARYALSVVPPGNALTNQIEDSVDEMAKAMFDGNFFKVIGLSSFAFE
NSADALGSIQNSTVVAKEVMPLVVGRSYCRTPSFIAYNYSQYVGSLLRTDPVAAEFLAYTALYYAHLAELN
>Mature_550_residues
ALARERGIRLSLLTPKRGPAGYAALSRSEGLSLALLLLGTLMLAYPALTYSPPAGYWGYAPAVVGSTSGALSNLSVRTLP
GEGRYYVGGALLGYDFQGSMGGAAVAAAIVAGKPLTSFDYLYYLEDLGYNITFRAAGPSGSALASTLTLLSLLNLRAVNH
PAMTGMIGLGGEVLVVGGVNVKAKAVKSYGIDTFLVPVGEAVPVKGLKVITVESIIDAAKYFTNQNVTAALGEVCNPPEE
LKKLNVFESHYKKLYDMTVELMKKYNINSTEITKNLKFARWAAEEGNYYAAASYAFTALINAYTIYYNRLLNVSSIDKAK
DVIKTEVDGLKRYAELEPSGCGANYWSAEACAAVYNREFRLKEMIKFLEAHANFTAPQSLSSVASTLARAKARAVSVELW
ASAVEELAQVPYAPPIRDLHALAREAYALGLAAARYALSVVPPGNALTNQIEDSVDEMAKAMFDGNFFKVIGLSSFAFEN
SADALGSIQNSTVVAKEVMPLVVGRSYCRTPSFIAYNYSQYVGSLLRTDPVAAEFLAYTALYYAHLAELN

Specific function: Unknown

COG id: COG1750

COG function: function code R; Archaeal serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59168; Mature: 59037

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARERGIRLSLLTPKRGPAGYAALSRSEGLSLALLLLGTLMLAYPALTYSPPAGYWGY
CCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
APAVVGSTSGALSNLSVRTLPGEGRYYVGGALLGYDFQGSMGGAAVAAAIVAGKPLTSFD
CCHHHCCCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCHHH
YLYYLEDLGYNITFRAAGPSGSALASTLTLLSLLNLRAVNHPAMTGMIGLGGEVLVVGGV
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCEEECCCCEEEEECC
NVKAKAVKSYGIDTFLVPVGEAVPVKGLKVITVESIIDAAKYFTNQNVTAALGEVCNPPE
CCCHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHH
ELKKLNVFESHYKKLYDMTVELMKKYNINSTEITKNLKFARWAAEEGNYYAAASYAFTAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCEEEEHHHHHHHH
INAYTIYYNRLLNVSSIDKAKDVIKTEVDGLKRYAELEPSGCGANYWSAEACAAVYNREF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCH
RLKEMIKFLEAHANFTAPQSLSSVASTLARAKARAVSVELWASAVEELAQVPYAPPIRDL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
HALAREAYALGLAAARYALSVVPPGNALTNQIEDSVDEMAKAMFDGNFFKVIGLSSFAFE
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCC
NSADALGSIQNSTVVAKEVMPLVVGRSYCRTPSFIAYNYSQYVGSLLRTDPVAAEFLAYT
CCHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHH
ALYYAHLAELN
HHHHHHHHHCC
>Mature Secondary Structure 
ALARERGIRLSLLTPKRGPAGYAALSRSEGLSLALLLLGTLMLAYPALTYSPPAGYWGY
CCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
APAVVGSTSGALSNLSVRTLPGEGRYYVGGALLGYDFQGSMGGAAVAAAIVAGKPLTSFD
CCHHHCCCCCCCCCCEEEECCCCCCEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCHHH
YLYYLEDLGYNITFRAAGPSGSALASTLTLLSLLNLRAVNHPAMTGMIGLGGEVLVVGGV
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHCEEECCCCEEEEECC
NVKAKAVKSYGIDTFLVPVGEAVPVKGLKVITVESIIDAAKYFTNQNVTAALGEVCNPPE
CCCHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHH
ELKKLNVFESHYKKLYDMTVELMKKYNINSTEITKNLKFARWAAEEGNYYAAASYAFTAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCEEEEHHHHHHHH
INAYTIYYNRLLNVSSIDKAKDVIKTEVDGLKRYAELEPSGCGANYWSAEACAAVYNREF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCH
RLKEMIKFLEAHANFTAPQSLSSVASTLARAKARAVSVELWASAVEELAQVPYAPPIRDL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
HALAREAYALGLAAARYALSVVPPGNALTNQIEDSVDEMAKAMFDGNFFKVIGLSSFAFE
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCC
NSADALGSIQNSTVVAKEVMPLVVGRSYCRTPSFIAYNYSQYVGSLLRTDPVAAEFLAYT
CCHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCEEEECHHHHHHHHHHCCHHHHHHHHHH
ALYYAHLAELN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA