| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937669
Identifier: 156937669
GI number: 156937669
Start: 777170
End: 778537
Strand: Reverse
Name: 156937669
Synonym: Igni_0876
Alternate gene names: NA
Gene position: 778537-777170 (Counterclockwise)
Preceding gene: 156937670
Following gene: 156937664
Centisome position: 60.0
GC content: 55.85
Gene sequence:
>1368_bases TTGTACGCGTCGCTGAAGCTGAGAGAGAAAGTAGAGAGGGCGATCGCGTACCTCTCGGCGAAGAATCCCGGGCTCGGCGG CCACGTCGCCAAGTACTCTGTAAAGGTCGGCGCTAGAGAAGGCGGCTACGCGTACTTCGACTACCGAGACGGCTCGGTAG TGGTCTCTAAGGAGTGGTTGTATAAGCTCGACCACAAAGGCTTGGGGGAGTTACTCGCTCACGAAGCCCTCCACGGGGTC CTCGGACACTGGATATACTTGAAAGAGAGGAAGGTCTCCCACCCCCTGCTGTGGAACTTGGCGTGCGACATAGAAGTCAA CAGCATATTAGAAGAATTGGGATTGTTCTCTAACTTGTATTCTTCAATGATAAAGTTGACGGGCTCGGAACCGGTAACTT GGAGGAGGTTCCGCTTCATAGGCGTAGGACCCAAAGAGCCCGCAGAGCTCATCTACGAGAAGTTGCTCAATTCCATCAAC AACAACGAGCTTAGGCTGGTAATAGAGAACCAGAGGGGCGAGAGGGAGGCCCACGGCCGCGGGGAGCGCTCCTATTACGA CTTCACCGTCGTGGTAAGCGACGTAGTTGACTCGGTAAGCAACGAGGAGAGGAGGGTCTACCCCAAGGAGAAGCTTTGGC ACGGCAGCAAGGACGTAGAGGAAGAATTTAAGAAATCTTACGAGTACTTCAAGAACACTAAGGATCCTACAAAATTGAAG GACAAAGTCGTAGAGCAAGCGGTTGAGCTGGCCGTCTCCTTGAGGAGGGCGGGCAACTTGCCGGGAGGGCTGGAGAGGTT CGTAGCGCCCTCCAAGCCGCAAGTTCAGTGGGCCTTGCTGTTGAGGAGCGCGCTGAAAAAGGGGACGATCAAGAGCGTGA GGAGCTGGCAAGTGCCCAACAGAAGGGGCCTCGAAGGCGTGCCGGGTTACTTGAGGACCGGCAACAACTTGTGGTTGCTC GTAGACACCTCAGCCTCGATAACTGACGAAGAGCTCTCAACGTTCTTAGCCGAAGTAGTTGCGATATCCAAGTTAGGTAA GGTAAACTTAGTCACTTGGGACGTAGAGCCGAACTTGGTGGTGACCGCCGCGAGCAGGAGCAGGCTCCTCAACTACGTCA AGAAGAGCGTCAAGGGAGGGGGAGGCACCCTCTCGCGGCCGGCGCTGGAATTCGTCTACAAAAAGATGAGGAGAGGGGAC GTGGTCGTGGTGCTCACGGACGGCTACTGGTTCGACGAGACTGAGGTAACTGACGTGATGCGTAAGATTAAGAAGTACTC CTCGGCCGCCGTGCTGGTGACGGTGGGGACGGTCCCGGAGGACGCTAGGGAGGCCGGATGGACGGTAATCCGCATCAAGA GGGCCTAA
Upstream 100 bases:
>100_bases GATAATCAAGACTCCGGAGGGATATGTAATAAAGAAGCTGCTGCCTGTAGCCTTCGTACCTTTAATCGAGGAGGAGTAGT CCCCGGAGAGGACGCGGGGG
Downstream 100 bases:
>100_bases CTACCTTGAACTCGGGGAGGAAGTCGAGGGCCTTGGACTTGTAGGCCCTCTTGTAGAGCTCCCTCAAGGCCTCCTCCCCT TCTTCGCCCATATCAAGGGT
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MYASLKLREKVERAIAYLSAKNPGLGGHVAKYSVKVGAREGGYAYFDYRDGSVVVSKEWLYKLDHKGLGELLAHEALHGV LGHWIYLKERKVSHPLLWNLACDIEVNSILEELGLFSNLYSSMIKLTGSEPVTWRRFRFIGVGPKEPAELIYEKLLNSIN NNELRLVIENQRGEREAHGRGERSYYDFTVVVSDVVDSVSNEERRVYPKEKLWHGSKDVEEEFKKSYEYFKNTKDPTKLK DKVVEQAVELAVSLRRAGNLPGGLERFVAPSKPQVQWALLLRSALKKGTIKSVRSWQVPNRRGLEGVPGYLRTGNNLWLL VDTSASITDEELSTFLAEVVAISKLGKVNLVTWDVEPNLVVTAASRSRLLNYVKKSVKGGGGTLSRPALEFVYKKMRRGD VVVVLTDGYWFDETEVTDVMRKIKKYSSAAVLVTVGTVPEDAREAGWTVIRIKRA
Sequences:
>Translated_455_residues MYASLKLREKVERAIAYLSAKNPGLGGHVAKYSVKVGAREGGYAYFDYRDGSVVVSKEWLYKLDHKGLGELLAHEALHGV LGHWIYLKERKVSHPLLWNLACDIEVNSILEELGLFSNLYSSMIKLTGSEPVTWRRFRFIGVGPKEPAELIYEKLLNSIN NNELRLVIENQRGEREAHGRGERSYYDFTVVVSDVVDSVSNEERRVYPKEKLWHGSKDVEEEFKKSYEYFKNTKDPTKLK DKVVEQAVELAVSLRRAGNLPGGLERFVAPSKPQVQWALLLRSALKKGTIKSVRSWQVPNRRGLEGVPGYLRTGNNLWLL VDTSASITDEELSTFLAEVVAISKLGKVNLVTWDVEPNLVVTAASRSRLLNYVKKSVKGGGGTLSRPALEFVYKKMRRGD VVVVLTDGYWFDETEVTDVMRKIKKYSSAAVLVTVGTVPEDAREAGWTVIRIKRA >Mature_455_residues MYASLKLREKVERAIAYLSAKNPGLGGHVAKYSVKVGAREGGYAYFDYRDGSVVVSKEWLYKLDHKGLGELLAHEALHGV LGHWIYLKERKVSHPLLWNLACDIEVNSILEELGLFSNLYSSMIKLTGSEPVTWRRFRFIGVGPKEPAELIYEKLLNSIN NNELRLVIENQRGEREAHGRGERSYYDFTVVVSDVVDSVSNEERRVYPKEKLWHGSKDVEEEFKKSYEYFKNTKDPTKLK DKVVEQAVELAVSLRRAGNLPGGLERFVAPSKPQVQWALLLRSALKKGTIKSVRSWQVPNRRGLEGVPGYLRTGNNLWLL VDTSASITDEELSTFLAEVVAISKLGKVNLVTWDVEPNLVVTAASRSRLLNYVKKSVKGGGGTLSRPALEFVYKKMRRGD VVVVLTDGYWFDETEVTDVMRKIKKYSSAAVLVTVGTVPEDAREAGWTVIRIKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018698 [H]
Pfam domain/function: PF09967 DUF2201 [H]
EC number: NA
Molecular weight: Translated: 51335; Mature: 51335
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYASLKLREKVERAIAYLSAKNPGLGGHVAKYSVKVGAREGGYAYFDYRDGSVVVSKEWL CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEHHHH YKLDHKGLGELLAHEALHGVLGHWIYLKERKVSHPLLWNLACDIEVNSILEELGLFSNLY HHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH SSMIKLTGSEPVTWRRFRFIGVGPKEPAELIYEKLLNSINNNELRLVIENQRGEREAHGR HHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC GERSYYDFTVVVSDVVDSVSNEERRVYPKEKLWHGSKDVEEEFKKSYEYFKNTKDPTKLK CCCCEEEHEEEHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH DKVVEQAVELAVSLRRAGNLPGGLERFVAPSKPQVQWALLLRSALKKGTIKSVRSWQVPN HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCC RRGLEGVPGYLRTGNNLWLLVDTSASITDEELSTFLAEVVAISKLGKVNLVTWDVEPNLV CCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE VTAASRSRLLNYVKKSVKGGGGTLSRPALEFVYKKMRRGDVVVVLTDGYWFDETEVTDVM EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEECCCHHHHHHH RKIKKYSSAAVLVTVGTVPEDAREAGWTVIRIKRA HHHHHHCCCEEEEEECCCCCHHHHCCCEEEEEECC >Mature Secondary Structure MYASLKLREKVERAIAYLSAKNPGLGGHVAKYSVKVGAREGGYAYFDYRDGSVVVSKEWL CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCEEEEHHHH YKLDHKGLGELLAHEALHGVLGHWIYLKERKVSHPLLWNLACDIEVNSILEELGLFSNLY HHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH SSMIKLTGSEPVTWRRFRFIGVGPKEPAELIYEKLLNSINNNELRLVIENQRGEREAHGR HHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHCCC GERSYYDFTVVVSDVVDSVSNEERRVYPKEKLWHGSKDVEEEFKKSYEYFKNTKDPTKLK CCCCEEEHEEEHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH DKVVEQAVELAVSLRRAGNLPGGLERFVAPSKPQVQWALLLRSALKKGTIKSVRSWQVPN HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCC RRGLEGVPGYLRTGNNLWLLVDTSASITDEELSTFLAEVVAISKLGKVNLVTWDVEPNLV CCCCCCCCHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE VTAASRSRLLNYVKKSVKGGGGTLSRPALEFVYKKMRRGDVVVVLTDGYWFDETEVTDVM EEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCEECCCHHHHHHH RKIKKYSSAAVLVTVGTVPEDAREAGWTVIRIKRA HHHHHHCCCEEEEEECCCCCHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8168477; 10360571 [H]