| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156937651
Identifier: 156937651
GI number: 156937651
Start: 761044
End: 761418
Strand: Direct
Name: 156937651
Synonym: Igni_0858
Alternate gene names: NA
Gene position: 761044-761418 (Clockwise)
Preceding gene: 156937649
Following gene: 156937652
Centisome position: 58.65
GC content: 49.07
Gene sequence:
>375_bases TTGAGGAAATTAACCGAAGTTAAGATAGAACTTGGACACAGGTCCTACAAATTGAACGTCCTCGGCCTCTACGTCCTCCA CTCTTTGTCGAACGGGCCTAAGAACGGCTACGATTTATTGAAAGAACTCAAAAGGTTGACAAATAACAAGTGGGTACCTC CCAAAAGTACAATCTACCCCTTGTTGAAGAAGATGGTGGAAGAGGGGCTGCTGGACGTAGACGAGCACGGCGTCTACAGC CTCACGGAGGCGGGACGGGCCGTGCTCAAGGCCTTGCGCCGCAACTCGGAGGCGATAAACGAGCTGGAGGAGAACATCAG CCTAATATTGAAGATAATAGAGGAGATAAAGTCCGAAGTACAGACGCAAGAATAA
Upstream 100 bases:
>100_bases ATTTTATGAGAAATCTAGATCTAATATAGGCAACGTCTATACCTATATTCACATATCTGTCAAAAAGCCCGGCGCACAAA GTCCGGTGGGGATGGAACTT
Downstream 100 bases:
>100_bases AAGGCCCCCCGCCCTCCTCTGGCGGGACTTGGGTGGGAGCTATTGCTCGACATAAAGTCGTTCATCGCTGACAGGGTCTC GTTAATGGAGTCGTCGGAGA
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: PadR Family Transcriptional Regulator
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRKLTEVKIELGHRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYPLLKKMVEEGLLDVDEHGVYS LTEAGRAVLKALRRNSEAINELEENISLILKIIEEIKSEVQTQE
Sequences:
>Translated_124_residues MRKLTEVKIELGHRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYPLLKKMVEEGLLDVDEHGVYS LTEAGRAVLKALRRNSEAINELEENISLILKIIEEIKSEVQTQE >Mature_124_residues MRKLTEVKIELGHRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYPLLKKMVEEGLLDVDEHGVYS LTEAGRAVLKALRRNSEAINELEENISLILKIIEEIKSEVQTQE
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14197; Mature: 14197
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLTEVKIELGHRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYP CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH LLKKMVEEGLLDVDEHGVYSLTEAGRAVLKALRRNSEAINELEENISLILKIIEEIKSEV HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH QTQE CCCC >Mature Secondary Structure MRKLTEVKIELGHRSYKLNVLGLYVLHSLSNGPKNGYDLLKELKRLTNNKWVPPKSTIYP CCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH LLKKMVEEGLLDVDEHGVYSLTEAGRAVLKALRRNSEAINELEENISLILKIIEEIKSEV HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH QTQE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA