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The map label for this gene is yjiR [C]

Identifier: 156937652

GI number: 156937652

Start: 761461

End: 762675

Strand: Direct

Name: yjiR [C]

Synonym: Igni_0859

Alternate gene names: 156937652

Gene position: 761461-762675 (Clockwise)

Preceding gene: 156937651

Following gene: 156937653

Centisome position: 58.69

GC content: 54.98

Gene sequence:

>1215_bases
TTGCTCGACATAAAGTCGTTCATCGCTGACAGGGTCTCGTTAATGGAGTCGTCGGAGATAAGGGAGATACTGGAGCTAAC
TGAAGGTAAGAACGTAATAAGCTTGGCCGGCGGCCTCCCTGACCCGAAGTACTTCCCTACCGAGGAGCTCGCCGAGATAT
CGGCGTACGTGATTAAGGAGTACGGCGCGCGCGCCTTGCAATACAGCATAACGAGGGGCTTGAGGGAGTTCAGGAAGGAG
ATAGCGGCTTTCATGGAAAGGACCGGAACGCCCGGTGAGATGCCTTATAACATAATAGTCACTTCCGGAAGCCAGCAAGC
CTTGAACCTCTTGGCCCAAGTCTTGGTGAACCCCGGAGACATAGTAGTAGTCGAAAAGCCAACCTACTTGGCGGCAATAA
ACGAGTTCAAGTCCGTAGGTGCCCTCTTCGAGGGCATACCCATAGACGACGACGGTATGAGGACCGATATCCTCGAGGAG
AGGCTCAAGGCTTTGAAAGCCGAAGGCAAGAAAGTCAAAGTCGTCTACACCGTGCCCACCGCCCAGAACCCCTCGGGCGT
CAGCATGAGCAACGAGAGACGCTCCCACTTGCTAGAGCTCGCGGAGGAGTACGACTTCTTGATAATAGAGGACGACCCCT
ACAGCCACTTCATGTTTGAGGACGTGGACTTCAAAAGGCTAAGGAGTATGGACAAATATAGAGTGATATACACTAGCACC
TTCAGCAAGATACTGGCCCCTGGGCTGAGGCTGGGGTGGGTGGCGGCGCACCCGGAGGTAATAGACGCCTTGGAAATAGC
CAAACAGAACGCGGACCTACACACGCCGACCTTCAACCAACTAATTGCGACCGAGGCGCTCAAGAGGGGGGTAGTGGATA
GACACATCCCCAAGGTCAAAGAAGCTTACAAGAAGAAGAGGGACGCTATGCTAAACGCCTTGGAGGAGTACATGGACGGC
GCGGCCAAGTGGACCAAGCCGGTCGGGGGACTCTTCGTCTTCGTCTACTTAGATGAGAACATAGACACTAAGGAGATGTT
GCCCGCGGCCCTCTCGGCCGGCGTGGCTTACGTCCCCGGCAGCGCGTTCTACGTCGACGGCAGCGGGCGCAACACGATGA
GGCTCAACTTCAGCTACCCGGACGAGGAGGAGATAAGGGTAGGCATCGAGAGGCTGTCCCAAGTAGTTAAGAGTTACGTC
AGAGGTAGCGTTTAA

Upstream 100 bases:

>100_bases
CAGCCTAATATTGAAGATAATAGAGGAGATAAAGTCCGAAGTACAGACGCAAGAATAAAAGGCCCCCCGCCCTCCTCTGG
CGGGACTTGGGTGGGAGCTA

Downstream 100 bases:

>100_bases
AATCCCAGATAGTGAAGGCGGGGGGAGACGAGCGTGAACAAGAGGAAGGAGAAGGGCAAGTCCCACTCAAAGAGGCCCGT
GAGGAATACCCCGCCGCGCT

Product: 2-aminoadipate aminotransferase

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLDIKSFIADRVSLMESSEIREILELTEGKNVISLAGGLPDPKYFPTEELAEISAYVIKEYGARALQYSITRGLREFRKE
IAAFMERTGTPGEMPYNIIVTSGSQQALNLLAQVLVNPGDIVVVEKPTYLAAINEFKSVGALFEGIPIDDDGMRTDILEE
RLKALKAEGKKVKVVYTVPTAQNPSGVSMSNERRSHLLELAEEYDFLIIEDDPYSHFMFEDVDFKRLRSMDKYRVIYTST
FSKILAPGLRLGWVAAHPEVIDALEIAKQNADLHTPTFNQLIATEALKRGVVDRHIPKVKEAYKKKRDAMLNALEEYMDG
AAKWTKPVGGLFVFVYLDENIDTKEMLPAALSAGVAYVPGSAFYVDGSGRNTMRLNFSYPDEEEIRVGIERLSQVVKSYV
RGSV

Sequences:

>Translated_404_residues
MLDIKSFIADRVSLMESSEIREILELTEGKNVISLAGGLPDPKYFPTEELAEISAYVIKEYGARALQYSITRGLREFRKE
IAAFMERTGTPGEMPYNIIVTSGSQQALNLLAQVLVNPGDIVVVEKPTYLAAINEFKSVGALFEGIPIDDDGMRTDILEE
RLKALKAEGKKVKVVYTVPTAQNPSGVSMSNERRSHLLELAEEYDFLIIEDDPYSHFMFEDVDFKRLRSMDKYRVIYTST
FSKILAPGLRLGWVAAHPEVIDALEIAKQNADLHTPTFNQLIATEALKRGVVDRHIPKVKEAYKKKRDAMLNALEEYMDG
AAKWTKPVGGLFVFVYLDENIDTKEMLPAALSAGVAYVPGSAFYVDGSGRNTMRLNFSYPDEEEIRVGIERLSQVVKSYV
RGSV
>Mature_404_residues
MLDIKSFIADRVSLMESSEIREILELTEGKNVISLAGGLPDPKYFPTEELAEISAYVIKEYGARALQYSITRGLREFRKE
IAAFMERTGTPGEMPYNIIVTSGSQQALNLLAQVLVNPGDIVVVEKPTYLAAINEFKSVGALFEGIPIDDDGMRTDILEE
RLKALKAEGKKVKVVYTVPTAQNPSGVSMSNERRSHLLELAEEYDFLIIEDDPYSHFMFEDVDFKRLRSMDKYRVIYTST
FSKILAPGLRLGWVAAHPEVIDALEIAKQNADLHTPTFNQLIATEALKRGVVDRHIPKVKEAYKKKRDAMLNALEEYMDG
AAKWTKPVGGLFVFVYLDENIDTKEMLPAALSAGVAYVPGSAFYVDGSGRNTMRLNFSYPDEEEIRVGIERLSQVVKSYV
RGSV

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=423, Percent_Identity=33.5697399527187, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI33469970, Length=423, Percent_Identity=33.5697399527187, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI95147551, Length=329, Percent_Identity=24.0121580547112, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI169881279, Length=329, Percent_Identity=24.0121580547112, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI1790797, Length=390, Percent_Identity=27.1794871794872, Blast_Score=158, Evalue=7e-40,
Organism=Escherichia coli, GI1787710, Length=385, Percent_Identity=27.2727272727273, Blast_Score=151, Evalue=8e-38,
Organism=Escherichia coli, GI1786816, Length=382, Percent_Identity=24.869109947644, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1788722, Length=321, Percent_Identity=24.6105919003115, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321236, Length=444, Percent_Identity=24.7747747747748, Blast_Score=146, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6321929, Length=497, Percent_Identity=24.1448692152917, Blast_Score=119, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6321000, Length=438, Percent_Identity=25.1141552511416, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21356535, Length=418, Percent_Identity=26.7942583732057, Blast_Score=151, Evalue=6e-37,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 45240; Mature: 45240

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIKSFIADRVSLMESSEIREILELTEGKNVISLAGGLPDPKYFPTEELAEISAYVIKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YGARALQYSITRGLREFRKEIAAFMERTGTPGEMPYNIIVTSGSQQALNLLAQVLVNPGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
IVVVEKPTYLAAINEFKSVGALFEGIPIDDDGMRTDILEERLKALKAEGKKVKVVYTVPT
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
AQNPSGVSMSNERRSHLLELAEEYDFLIIEDDPYSHFMFEDVDFKRLRSMDKYRVIYTST
CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCHHHHCCCCCEEEEEHHH
FSKILAPGLRLGWVAAHPEVIDALEIAKQNADLHTPTFNQLIATEALKRGVVDRHIPKVK
HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
EAYKKKRDAMLNALEEYMDGAAKWTKPVGGLFVFVYLDENIDTKEMLPAALSAGVAYVPG
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEECCC
SAFYVDGSGRNTMRLNFSYPDEEEIRVGIERLSQVVKSYVRGSV
CEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDIKSFIADRVSLMESSEIREILELTEGKNVISLAGGLPDPKYFPTEELAEISAYVIKE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH
YGARALQYSITRGLREFRKEIAAFMERTGTPGEMPYNIIVTSGSQQALNLLAQVLVNPGD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCC
IVVVEKPTYLAAINEFKSVGALFEGIPIDDDGMRTDILEERLKALKAEGKKVKVVYTVPT
EEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECC
AQNPSGVSMSNERRSHLLELAEEYDFLIIEDDPYSHFMFEDVDFKRLRSMDKYRVIYTST
CCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEECCCCHHHHCCCCCEEEEEHHH
FSKILAPGLRLGWVAAHPEVIDALEIAKQNADLHTPTFNQLIATEALKRGVVDRHIPKVK
HHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH
EAYKKKRDAMLNALEEYMDGAAKWTKPVGGLFVFVYLDENIDTKEMLPAALSAGVAYVPG
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCEEECCC
SAFYVDGSGRNTMRLNFSYPDEEEIRVGIERLSQVVKSYVRGSV
CEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]