| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
Click here to switch to the map view.
The map label for this gene is mtnU [H]
Identifier: 156937650
GI number: 156937650
Start: 760090
End: 760869
Strand: Reverse
Name: mtnU [H]
Synonym: Igni_0857
Alternate gene names: 156937650
Gene position: 760869-760090 (Counterclockwise)
Preceding gene: 156937657
Following gene: 156937645
Centisome position: 58.64
GC content: 57.31
Gene sequence:
>780_bases ATGGGCTTGCGCGTCGCCTTAGTCCAGATGAAGGTAACGGACGGGAACGTACACGCTAACCTAAAGAGAATTGAGGCATC ATTGAAGTACGCTATTGAACATTATTCTGTGGAAGCTGCCTTCACCCCCGAGCTCTCCCTGACCGGATTTTCGATACCCT CTAAGGAAGACGTGCGCGGGGCTGTTAACCGCATAAAGGAGCTGAGCGACGGAGTAGCTATAGGCGTGGGCGCGACCTAC TTCGAGGGAGATAAAACTTACAACTCATATTTGATCGTCCGCGACGGGGACGTGCTCCACGTCAGAAAGAAGTTCATGTT GTTCGAGCCCATGGGGGAACACCAGACCTTCGCGAGGGGCGAACCCCCAACCACGTTCTACCTTAAGGACCTAAAGTTCT CAGTCTTGATATGCTACGAGTTGAGGTTCCCGGAGCTGTTCGCGCGGGTGCTGGACGCCGAGGCCTTGGTGGTCCCCGCC GCGTGGCCCTCCTCGAGGAAGGAGCACTGGCGCACGCTCTTACGGGCCAGGGCGGTGGAGGCTTCGAGCTACGTCTTGGG GGTTAACCGTTGGGGAGAGGGCCTCCACGGGCCCTTCGGCGGGTGGAGCTCCTCCTCCACGCCCGAGGGAGAAACGACCT TAGGCGAGGGCGAGGGACTCCTCGTAACCGAGCTCGATAAGGATAAAATAGAAGAATGGAGGGAGTTCCCGTCGTATAAG GATAGGCTTAGCTTGTTAGGAATTCGGCCAGCTTCTGGGCGTCGCTCCGGTACAAGTTGA
Upstream 100 bases:
>100_bases TATTAGATCTAGATTTCTCATAAAATATACCCCCTTCTCTAGGTGGAGCTGCAGAGCTTGCTTGGAAAATAAATCGTCAT TCCGGAAACCTAAGGGGGAC
Downstream 100 bases:
>100_bases GGAGGGCCTTAGTACCTATCAGTTCTAACCTAGCCTCTTCGTCTTCCTCGGCTATGGGCTCTAACAGCTTGAGCTTCCTC TCCAAGCTCTTTATCTCAAG
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MGLRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFSIPSKEDVRGAVNRIKELSDGVAIGVGATY FEGDKTYNSYLIVRDGDVLHVRKKFMLFEPMGEHQTFARGEPPTTFYLKDLKFSVLICYELRFPELFARVLDAEALVVPA AWPSSRKEHWRTLLRARAVEASSYVLGVNRWGEGLHGPFGGWSSSSTPEGETTLGEGEGLLVTELDKDKIEEWREFPSYK DRLSLLGIRPASGRRSGTS
Sequences:
>Translated_259_residues MGLRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFSIPSKEDVRGAVNRIKELSDGVAIGVGATY FEGDKTYNSYLIVRDGDVLHVRKKFMLFEPMGEHQTFARGEPPTTFYLKDLKFSVLICYELRFPELFARVLDAEALVVPA AWPSSRKEHWRTLLRARAVEASSYVLGVNRWGEGLHGPFGGWSSSSTPEGETTLGEGEGLLVTELDKDKIEEWREFPSYK DRLSLLGIRPASGRRSGTS >Mature_258_residues GLRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFSIPSKEDVRGAVNRIKELSDGVAIGVGATYF EGDKTYNSYLIVRDGDVLHVRKKFMLFEPMGEHQTFARGEPPTTFYLKDLKFSVLICYELRFPELFARVLDAEALVVPAA WPSSRKEHWRTLLRARAVEASSYVLGVNRWGEGLHGPFGGWSSSSTPEGETTLGEGEGLLVTELDKDKIEEWREFPSYKD RLSLLGIRPASGRRSGTS
Specific function: May be involved in a regulatory step in the methylthioribose (MTR) recycling pathway [H]
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786412, Length=251, Percent_Identity=27.4900398406374, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323383, Length=272, Percent_Identity=30.8823529411765, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 3.5.-.- [C]
Molecular weight: Translated: 28887; Mature: 28756
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFSIPSKEDVRG CCEEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCCCHHHHHH AVNRIKELSDGVAIGVGATYFEGDKTYNSYLIVRDGDVLHVRKKFMLFEPMGEHQTFARG HHHHHHHHCCCEEEECCCEEECCCCCCCCEEEEECCCEEEEEHHEEEECCCCCCCCCCCC EPPTTFYLKDLKFSVLICYELRFPELFARVLDAEALVVPAAWPSSRKEHWRTLLRARAVE CCCCEEEEECCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC ASSYVLGVNRWGEGLHGPFGGWSSSSTPEGETTLGEGEGLLVTELDKDKIEEWREFPSYK CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHH DRLSLLGIRPASGRRSGTS HHHHEEECCCCCCCCCCCC >Mature Secondary Structure GLRVALVQMKVTDGNVHANLKRIEASLKYAIEHYSVEAAFTPELSLTGFSIPSKEDVRG CEEEEEEEEEEECCCEEHHHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCCCHHHHHH AVNRIKELSDGVAIGVGATYFEGDKTYNSYLIVRDGDVLHVRKKFMLFEPMGEHQTFARG HHHHHHHHCCCEEEECCCEEECCCCCCCCEEEEECCCEEEEEHHEEEECCCCCCCCCCCC EPPTTFYLKDLKFSVLICYELRFPELFARVLDAEALVVPAAWPSSRKEHWRTLLRARAVE CCCCEEEEECCCEEEEEEEECCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCC ASSYVLGVNRWGEGLHGPFGGWSSSSTPEGETTLGEGEGLLVTELDKDKIEEWREFPSYK CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHH DRLSLLGIRPASGRRSGTS HHHHEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 12022921 [H]