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The map label for this gene is rps8e

Identifier: 156937560

GI number: 156937560

Start: 686668

End: 687060

Strand: Direct

Name: rps8e

Synonym: Igni_0767

Alternate gene names: 156937560

Gene position: 686668-687060 (Clockwise)

Preceding gene: 156937556

Following gene: 156937561

Centisome position: 52.92

GC content: 51.15

Gene sequence:

>393_bases
TTGGGCGTGTACCACGGCCCGGACTTGAAGAAGATAACTGGCGGCAAGAAGAGGAGACACAGAAAGGTCAAGAGGAAGTA
CTGGATGGGTCGTTACCCAACCAACACTACCTTAGCTGAGAACGAGAAGAGAAAGATAGAGAGGGTAAGGGGAGGTAACA
TCAAGGTGAGGCTCAGGTATGCCGCCTATGCTAACGTGGTTGACCCCAACGAAAACGTCGCGAAAAAGGTGAAGATACTG
AGAGTTCTAGAAACTCCAGCCAATAAGGAGTTAGCGAGACACGGCATCATTGTTAAAGGAACCAAGATAGAGACCGAGCT
GGGCGTCGCGGTGGTCACCTCCCGGCCGGGTCAAGACGGAGTGATTAACGCAGTGTTAATAGAGAGGAAGTGA

Upstream 100 bases:

>100_bases
GCCGTCACCACGAGTAAGCGTGTTATGTTCGGCCCCCGCTGACAGCCGCGCGAGAGTGAAAAAATAAAGCGCTCGCTGGG
GGCGCAACGGGGACGCGACG

Downstream 100 bases:

>100_bases
GGCGTATATGACGTTAAAGAAGTATAAGGGGAAGTACGTTATTTTATGGCCACAGTACTTCGATTCCTCCTTGAGCCGGA
AGGAGGGACGTCGGGTCCCC

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGVYHGPDLKKITGGKKRRHRKVKRKYWMGRYPTNTTLAENEKRKIERVRGGNIKVRLRYAAYANVVDPNENVAKKVKIL
RVLETPANKELARHGIIVKGTKIETELGVAVVTSRPGQDGVINAVLIERK

Sequences:

>Translated_130_residues
MGVYHGPDLKKITGGKKRRHRKVKRKYWMGRYPTNTTLAENEKRKIERVRGGNIKVRLRYAAYANVVDPNENVAKKVKIL
RVLETPANKELARHGIIVKGTKIETELGVAVVTSRPGQDGVINAVLIERK
>Mature_129_residues
GVYHGPDLKKITGGKKRRHRKVKRKYWMGRYPTNTTLAENEKRKIERVRGGNIKVRLRYAAYANVVDPNENVAKKVKILR
VLETPANKELARHGIIVKGTKIETELGVAVVTSRPGQDGVINAVLIERK

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_IGNH4 (A8AAJ7)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435356.1
- ProteinModelPortal:   A8AAJ7
- STRING:   A8AAJ7
- GeneID:   5561766
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0767
- eggNOG:   arNOG11360
- HOGENOM:   HBG745393
- OMA:   GGNRKVR
- ProtClustDB:   PRK04049
- BioCyc:   IHOS453591:IGNI_0767-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 14725; Mature: 14593

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVYHGPDLKKITGGKKRRHRKVKRKYWMGRYPTNTTLAENEKRKIERVRGGNIKVRLRY
CCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE
AAYANVVDPNENVAKKVKILRVLETPANKELARHGIIVKGTKIETELGVAVVTSRPGQDG
EEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCEECCCCCEEEEECCCCCCC
VINAVLIERK
CEEEEEEECC
>Mature Secondary Structure 
GVYHGPDLKKITGGKKRRHRKVKRKYWMGRYPTNTTLAENEKRKIERVRGGNIKVRLRY
CCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE
AAYANVVDPNENVAKKVKILRVLETPANKELARHGIIVKGTKIETELGVAVVTSRPGQDG
EEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEECCEECCCCCEEEEECCCCCCC
VINAVLIERK
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA