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The map label for this gene is srp19

Identifier: 156937561

GI number: 156937561

Start: 687068

End: 687367

Strand: Direct

Name: srp19

Synonym: Igni_0768

Alternate gene names: 156937561

Gene position: 687068-687367 (Clockwise)

Preceding gene: 156937560

Following gene: 156937562

Centisome position: 52.95

GC content: 57.33

Gene sequence:

>300_bases
ATGACGTTAAAGAAGTATAAGGGGAAGTACGTTATTTTATGGCCACAGTACTTCGATTCCTCCTTGAGCCGGAAGGAGGG
ACGTCGGGTCCCCCGGGAGCTCGCGGTGGCGAGGCCCTCCCAGAAGGAACTGTTAGAGGTCGCCGCTGCCTTGGGTTTGG
AAGCCAAGCCGCTGGAGGGTAAGTACCCTAGAGAGTGGTGGAACAAGGAGGGCCCCGTCTTAGTTGAGAAGAGGGGGAGC
AAGCGCGAGGTGATAACGTTACTGGCCAAGGAACTGCGGAGGAGGAGGTACGGGAAGTAG

Upstream 100 bases:

>100_bases
ACCAAGATAGAGACCGAGCTGGGCGTCGCGGTGGTCACCTCCCGGCCGGGTCAAGACGGAGTGATTAACGCAGTGTTAAT
AGAGAGGAAGTGAGGCGTAT

Downstream 100 bases:

>100_bases
ACGAACAGTTTCAACCGAATAATAAGTGGGAGCGGTAATACCTACATAACACGGGGGCCGGGTAGTGAAGTTTCATGTGT
ACAAGGTTACGCGTACCGGA

Product: signal recognition particle, subunit SRP19 (srp19)

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTLKKYKGKYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEGKYPREWWNKEGPVLVEKRGS
KREVITLLAKELRRRRYGK

Sequences:

>Translated_99_residues
MTLKKYKGKYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEGKYPREWWNKEGPVLVEKRGS
KREVITLLAKELRRRRYGK
>Mature_98_residues
TLKKYKGKYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEGKYPREWWNKEGPVLVEKRGSK
REVITLLAKELRRRRYGK

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_IGNH4 (A8AAJ8)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001435357.1
- ProteinModelPortal:   A8AAJ8
- SMR:   A8AAJ8
- STRING:   A8AAJ8
- GeneID:   5561787
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0768
- eggNOG:   arNOG12644
- HOGENOM:   HBG629394
- OMA:   VEACKEL
- BioCyc:   IHOS453591:IGNI_0768-MONOMER
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30
- PANTHER:   PTHR17453

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 11626; Mature: 11495

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKYKGKYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEG
CCCCCCCCCEEEECHHHHCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
KYPREWWNKEGPVLVEKRGSKREVITLLAKELRRRRYGK
CCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLKKYKGKYVILWPQYFDSSLSRKEGRRVPRELAVARPSQKELLEVAAALGLEAKPLEG
CCCCCCCCEEEECHHHHCHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
KYPREWWNKEGPVLVEKRGSKREVITLLAKELRRRRYGK
CCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA