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The map label for this gene is 156936887

Identifier: 156936887

GI number: 156936887

Start: 86708

End: 87322

Strand: Reverse

Name: 156936887

Synonym: Igni_0092

Alternate gene names: NA

Gene position: 87322-86708 (Counterclockwise)

Preceding gene: 156936888

Following gene: 156936881

Centisome position: 6.73

GC content: 52.85

Gene sequence:

>615_bases
TTGATAAAATTCGTGATAGACACCAGCGCGGTTACCGACCCCAGACTGAGACAGCTGTTCGGCGTCAACGAGTTGTGGGA
GGTCGTCGAAAAGTATCTGGAATTGATGGCGTTGGCCAAACTCAAGTTGGGCTTTTCGTTCTACACCACTCCAAGCGTGA
TGAAAGAAATTAAAGGGTTCTTGGAGAGATCTATGTGTCCGTCGGAAATAATAAGTAAGCTCGGAGTTTGGATACTTGTA
AAGGACGTAAGTCAGACGGAGGCCAAGATACCGGCGAGGGTCTTCTTGGAGTACGTCGCAGAGGTGAAGAGGAGGTTGGA
CAAGGGCCTCAGGGTGGCAGAGGAGAGCACTCGAAGGGCCATGGAAGGCGGGGAGATAGGCGAACACATCCGCAACTTGA
GGGAGAAGTACCGCGAGGCCACGCGTAAGGGACTATTGGACTCCGTGGCCGACTTAGAAGCGGCGATACTGGCCCTAGAG
CTCGGGGCGGTCCTAGTTACGAACGACGAAGGCTTATGCAAGCTGGCGTCGAAGCTAGGGGTCAGCTGTATCGACCCCCT
GACGTTCGTCAAAACGATAGAGGAGTACCTAAATTTAATCAAAAGGCACGGCTAG

Upstream 100 bases:

>100_bases
CGAAGGCCCGCGCTCTTCCTGGCTGAGCTACGGGGGCCGGGCGCTGGGGGGAGGCCCAACTAAATAGCTTCTCACGTACG
CCTCGCGACGGGCAAGACTC

Downstream 100 bases:

>100_bases
CCCTCACCAACTACCATCTCGCCGTCGAGCTTTACTACCTTAATGTTCAGCTTCTTCATCAACTCTCCTATTTCCCCCAA
CACTGCCGCCACCATCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MIKFVIDTSAVTDPRLRQLFGVNELWEVVEKYLELMALAKLKLGFSFYTTPSVMKEIKGFLERSMCPSEIISKLGVWILV
KDVSQTEAKIPARVFLEYVAEVKRRLDKGLRVAEESTRRAMEGGEIGEHIRNLREKYREATRKGLLDSVADLEAAILALE
LGAVLVTNDEGLCKLASKLGVSCIDPLTFVKTIEEYLNLIKRHG

Sequences:

>Translated_204_residues
MIKFVIDTSAVTDPRLRQLFGVNELWEVVEKYLELMALAKLKLGFSFYTTPSVMKEIKGFLERSMCPSEIISKLGVWILV
KDVSQTEAKIPARVFLEYVAEVKRRLDKGLRVAEESTRRAMEGGEIGEHIRNLREKYREATRKGLLDSVADLEAAILALE
LGAVLVTNDEGLCKLASKLGVSCIDPLTFVKTIEEYLNLIKRHG
>Mature_204_residues
MIKFVIDTSAVTDPRLRQLFGVNELWEVVEKYLELMALAKLKLGFSFYTTPSVMKEIKGFLERSMCPSEIISKLGVWILV
KDVSQTEAKIPARVFLEYVAEVKRRLDKGLRVAEESTRRAMEGGEIGEHIRNLREKYREATRKGLLDSVADLEAAILALE
LGAVLVTNDEGLCKLASKLGVSCIDPLTFVKTIEEYLNLIKRHG

Specific function: Unknown

COG id: COG1458

COG function: function code R; Predicted DNA-binding protein containing PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0278 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y092_IGNH4 (A8A8M4)

Other databases:

- EMBL:   CP000816
- RefSeq:   YP_001434683.1
- STRING:   A8A8M4
- GeneID:   5562151
- GenomeReviews:   CP000816_GR
- KEGG:   iho:Igni_0092
- eggNOG:   arNOG05878
- HOGENOM:   HBG507856
- OMA:   KTPNRYE
- ProtClustDB:   PRK04358
- BioCyc:   IHOS453591:IGNI_0092-MONOMER
- HAMAP:   MF_01078
- InterPro:   IPR006596
- InterPro:   IPR014856
- InterPro:   IPR022785
- SMART:   SM00670
- TIGRFAMs:   TIGR03875

Pfam domain/function: PF08745 UPF0278

EC number: NA

Molecular weight: Translated: 23002; Mature: 23002

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFVIDTSAVTDPRLRQLFGVNELWEVVEKYLELMALAKLKLGFSFYTTPSVMKEIKGF
CEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHH
LERSMCPSEIISKLGVWILVKDVSQTEAKIPARVFLEYVAEVKRRLDKGLRVAEESTRRA
HHHCCCHHHHHHHHCHHHEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEGGEIGEHIRNLREKYREATRKGLLDSVADLEAAILALELGAVLVTNDEGLCKLASKLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHC
VSCIDPLTFVKTIEEYLNLIKRHG
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKFVIDTSAVTDPRLRQLFGVNELWEVVEKYLELMALAKLKLGFSFYTTPSVMKEIKGF
CEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHH
LERSMCPSEIISKLGVWILVKDVSQTEAKIPARVFLEYVAEVKRRLDKGLRVAEESTRRA
HHHCCCHHHHHHHHCHHHEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEGGEIGEHIRNLREKYREATRKGLLDSVADLEAAILALELGAVLVTNDEGLCKLASKLG
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHC
VSCIDPLTFVKTIEEYLNLIKRHG
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA