Click here to switch to the map view.

The map label for this gene is yccW [C]

Identifier: 156936846

GI number: 156936846

Start: 48192

End: 49349

Strand: Direct

Name: yccW [C]

Synonym: Igni_0051

Alternate gene names: 156936846

Gene position: 48192-49349 (Clockwise)

Preceding gene: 156936845

Following gene: 156936850

Centisome position: 3.71

GC content: 56.99

Gene sequence:

>1158_bases
ATGAAGGTGGAAGTGACGTCTGAGGCAATAAGGAAGGCTAAGCTAGTCGGGCCGGTAATATATCAAAAGCACGTTAAGGG
GAAGGCCGAAGTAGGCGAGCTCGTTGAGGTCGAAGGCGAAGGGGGGAAGCTCTGCGCCCTCTGGGACGAGACCGGCCCCG
TGAGGCTCAGAGTGCTGTTCTGGCACGAGTGCCCGGGATCGGTGGAGGACGCCATTCGAGAGGCCTTAATTAGGGCTTAT
AGGACTAGGGAGGCGAACGGCTCGGCCTCTTGGGAGGCCTACAGGCTAGTCAACAGCGACGGCGACTCCTTCCCCGGCCT
AATAGTTGACGTCTACAAGGATTTGGCCGTCCTCCAGTCCTCCTCCCTAGCTATAGACAAGCACATAATGACCATAGCGA
AGATAGTGAAGGACGTGACCGGGGCGGAGGCGGTGGCCGAGAAGAGCTCCCAGAGGGTCAGGGCCAAGGTGGGCTTGCCC
CCTAGGGAGGGCCTCTTGATAGGCAACAAGAAGGAGACCGTGGTGGACGAGGAGGGGGTGAAGTTCAAGGTGAGCATAGA
GGGGCAGAAGACCGGGCTCTACTTGGACCAGAGGGAGAACCGGGTTTACGCGGAGAGGTTCTCTTCCGGCTCTAAGTTCT
TGGACGCCTTCTCCTACACCGGCGGCTTCGGCCTCCACGCCTTGAAGGCCGGCGCGAGGGAAGTAACCTTCGTGGACGAG
GACCCTTGGGCTTTGAGGGTTCTGAGGGAGAACTTGAGGCTGAACAACTTCGACGAGGGGAAGGTGAGAGTAGTTAGGGA
GGACATCTGGAGTTATCTGAGAGCTCGACTCAAGAGGAGGGAAACCACAGAGGTCGCGAGCTACGACCCACCGGCGTTCA
TCCCCACCAAGGAAAAGTTGGAGGAGGGGATGAGAGACTACATGAGGCTCTACGTTTACGCTTTGAAGCTCGCGGACCCC
TCGAGTGTGGTGATGTTGTCGTCTTGTTCTCAACCGTTTACGAGGGACATGTTCTTGTGGACGATAGCTAAGGCCTCTTA
CTTCAGTAATAGGGAGTCTAGAGTCTTCGCGGTTAGGGGTGCTTCAAGGGACCACGTATTTCCTCCCGGCTCCACTTACA
TGGAATACCTCAAGTTCGCCGCCCTCTCAGTATTTTGA

Upstream 100 bases:

>100_bases
GCTACCACAGTTGGTACATCGAGGATAAAGGGATAAACCCGGGGACCGCCGCTGACATAATAGCCGTTTCAATACTTCTG
GCGCTGGCTGAGGAAGCGAG

Downstream 100 bases:

>100_bases
AATAGTAACAACACCTCACGAACCACAAGAGCCAGCTCGCCAGTCCCTTCCCTACTATGAACGAGAGTAGAGCTGCGGAA
TCAATGACAGAGTCTGCCTT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKVEVTSEAIRKAKLVGPVIYQKHVKGKAEVGELVEVEGEGGKLCALWDETGPVRLRVLFWHECPGSVEDAIREALIRAY
RTREANGSASWEAYRLVNSDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLP
PREGLLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDE
DPWALRVLRENLRLNNFDEGKVRVVREDIWSYLRARLKRRETTEVASYDPPAFIPTKEKLEEGMRDYMRLYVYALKLADP
SSVVMLSSCSQPFTRDMFLWTIAKASYFSNRESRVFAVRGASRDHVFPPGSTYMEYLKFAALSVF

Sequences:

>Translated_385_residues
MKVEVTSEAIRKAKLVGPVIYQKHVKGKAEVGELVEVEGEGGKLCALWDETGPVRLRVLFWHECPGSVEDAIREALIRAY
RTREANGSASWEAYRLVNSDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLP
PREGLLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDE
DPWALRVLRENLRLNNFDEGKVRVVREDIWSYLRARLKRRETTEVASYDPPAFIPTKEKLEEGMRDYMRLYVYALKLADP
SSVVMLSSCSQPFTRDMFLWTIAKASYFSNRESRVFAVRGASRDHVFPPGSTYMEYLKFAALSVF
>Mature_385_residues
MKVEVTSEAIRKAKLVGPVIYQKHVKGKAEVGELVEVEGEGGKLCALWDETGPVRLRVLFWHECPGSVEDAIREALIRAY
RTREANGSASWEAYRLVNSDGDSFPGLIVDVYKDLAVLQSSSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLP
PREGLLIGNKKETVVDEEGVKFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDE
DPWALRVLRENLRLNNFDEGKVRVVREDIWSYLRARLKRRETTEVASYDPPAFIPTKEKLEEGMRDYMRLYVYALKLADP
SSVVMLSSCSQPFTRDMFLWTIAKASYFSNRESRVFAVRGASRDHVFPPGSTYMEYLKFAALSVF

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=376, Percent_Identity=29.2553191489362, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787181, Length=260, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 43331; Mature: 43331

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEVTSEAIRKAKLVGPVIYQKHVKGKAEVGELVEVEGEGGKLCALWDETGPVRLRVLF
CEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEE
WHECPGSVEDAIREALIRAYRTREANGSASWEAYRLVNSDGDSFPGLIVDVYKDLAVLQS
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
SSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREGLLIGNKKETVVDEEGV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCEEECCCCCCEECCCCC
KFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDE
EEEEEECCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEECC
DPWALRVLRENLRLNNFDEGKVRVVREDIWSYLRARLKRRETTEVASYDPPAFIPTKEKL
CCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHH
EEGMRDYMRLYVYALKLADPSSVVMLSSCSQPFTRDMFLWTIAKASYFSNRESRVFAVRG
HHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
ASRDHVFPPGSTYMEYLKFAALSVF
CCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVEVTSEAIRKAKLVGPVIYQKHVKGKAEVGELVEVEGEGGKLCALWDETGPVRLRVLF
CEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEE
WHECPGSVEDAIREALIRAYRTREANGSASWEAYRLVNSDGDSFPGLIVDVYKDLAVLQS
EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCC
SSLAIDKHIMTIAKIVKDVTGAEAVAEKSSQRVRAKVGLPPREGLLIGNKKETVVDEEGV
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCEEECCCCCCEECCCCC
KFKVSIEGQKTGLYLDQRENRVYAERFSSGSKFLDAFSYTGGFGLHALKAGAREVTFVDE
EEEEEECCCCCCEEEECCCCCHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCEEEEECC
DPWALRVLRENLRLNNFDEGKVRVVREDIWSYLRARLKRRETTEVASYDPPAFIPTKEKL
CCHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHH
EEGMRDYMRLYVYALKLADPSSVVMLSSCSQPFTRDMFLWTIAKASYFSNRESRVFAVRG
HHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
ASRDHVFPPGSTYMEYLKFAALSVF
CCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]