| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936845
Identifier: 156936845
GI number: 156936845
Start: 47461
End: 48195
Strand: Direct
Name: 156936845
Synonym: Igni_0050
Alternate gene names: NA
Gene position: 47461-48195 (Clockwise)
Preceding gene: 156936844
Following gene: 156936846
Centisome position: 3.66
GC content: 55.51
Gene sequence:
>735_bases GTGTCCCTGGCAGTAGCTCTGGAGGCCGGCATATGTAAGCCCGGGAACGTCTGTCCGGAGAGGGCCGGAAGCTTCTCATA TCCCGACATACTAGTGGACGCCTTCGAGCTCCAGTGGGCGTGTCGCCTCTCTCAAAGGGGCGCCCCGCTGGGACTGGTTT ACCGCGAGGCCTTGGGGGCTCAGCGGAGTACCCTTACGGGTTATGTCATATTAGCGGTACCCCTAATGAGACACTTGTCG AAGGGGTTGGATGCGACTAAGCGCGCTTTGGAAGATCTGAAGGCGAGTAAGGTTTACGACGCACAGCTCTTCTTGAAGTC CCTCTCGGAAACCGGCTTAAGCCACTACAAGAAGGTAGAAGGCTTCGTCGACGCCGACGAGTGGTGGACATTCGAGGGAA ACCTCTGGGACCTCTTCCTCTACTTGTCGAAATTTGACGACTTGTTTAGAGAGATAGTTAAAGGATATCCGTTAAGCTTG GAAGGCGCCCTCCGACTAATTCGGGAGGGTTATTCCAAGCGCACGCTCGAAGGGCTGCAGCGCTTCGTGCTTTCTAACAT TATAGACAGTTTGGTGGCTCGCAAGCACGGCTACAGGGTGGCCTTGGGGCTCAATAGGGCCGCCAAGGAGGGCTACCACA GTTGGTACATCGAGGATAAAGGGATAAACCCGGGGACCGCCGCTGACATAATAGCCGTTTCAATACTTCTGGCGCTGGCT GAGGAAGCGAGATGA
Upstream 100 bases:
>100_bases GGGGTTATGAGGTCGTTATCGAAGGAATCCTAGAGGTGAGGGCGGACGGGGTGAGAGTATCCTTACCTCCGGGAGGAAGG TTAGAGATACTTGCTCCTTA
Downstream 100 bases:
>100_bases AGGTGGAAGTGACGTCTGAGGCAATAAGGAAGGCTAAGCTAGTCGGGCCGGTAATATATCAAAAGCACGTTAAGGGGAAG GCCGAAGTAGGCGAGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLS KGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSL EGALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA EEAR
Sequences:
>Translated_244_residues MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLS KGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSL EGALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA EEAR >Mature_243_residues SLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGAQRSTLTGYVILAVPLMRHLSK GLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVEGFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLE GALRLIREGYSKRTLEGLQRFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALAE EAR
Specific function: Unknown
COG id: COG1767
COG function: function code H; Triphosphoribosyl-dephospho-CoA synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27175; Mature: 27043
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGA CCEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC QRSTLTGYVILAVPLMRHLSKGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLEGALRLIREGYSKRTLEGLQ CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH RFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA HHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH EEAR HHCC >Mature Secondary Structure SLAVALEAGICKPGNVCPERAGSFSYPDILVDAFELQWACRLSQRGAPLGLVYREALGA CEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC QRSTLTGYVILAVPLMRHLSKGLDATKRALEDLKASKVYDAQLFLKSLSETGLSHYKKVE CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVDADEWWTFEGNLWDLFLYLSKFDDLFREIVKGYPLSLEGALRLIREGYSKRTLEGLQ CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHH RFVLSNIIDSLVARKHGYRVALGLNRAAKEGYHSWYIEDKGINPGTAADIIAVSILLALA HHHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH EEAR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA