| Definition | Ignicoccus hospitalis KIN4/I chromosome, complete genome. |
|---|---|
| Accession | NC_009776 |
| Length | 1,297,538 |
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The map label for this gene is 156936809
Identifier: 156936809
GI number: 156936809
Start: 13348
End: 13752
Strand: Reverse
Name: 156936809
Synonym: Igni_0014
Alternate gene names: NA
Gene position: 13752-13348 (Counterclockwise)
Preceding gene: 156936810
Following gene: 156936808
Centisome position: 1.06
GC content: 48.15
Gene sequence:
>405_bases GTGTCAAAGTGCAGAGAGCTAATAAAAGAGTTCGGCTCTCTCAAGGTGACCACCACTCGACTGGCGATACTGTTCTACCT TATGGTTAACAAGTGGAGCAAATTGGGCGACATTGCTAAACATTTGGGGTTAACGAAGTCGACAGTTTGGAAACACTTGA AGGAGATGCAAGAAGAGGGTTTAGTGAAAGTGAAGTACAGTTTAGGCCGCCACCCTCAGATGAACGTTGCCTTAACCGAG AAGGGCGCGAAGTTGGTGCTCCAATACGCTGGCCTACTGGAAAAAGTCATAGAGTGTCTAGAGGGCGAGGGAGAAAAGAG CGAGAAAGGGGAGAGCGAGGGCGTCGAAGGACATGAGGAAAGCGAAGATAGGTCTGGAAGTACACATTCAACTGACCAAA CTTAA
Upstream 100 bases:
>100_bases ACTTCATAGCTAAGAGACCTTCCGAACTAATAGTAAGCGGGGCCCTTTCAATATCTGACGTCTTTGTGATTTTAGGAATA AACGTCGTGGGGGTGACGTT
Downstream 100 bases:
>100_bases GACTAAGCTCTTCTGTTCTTGCCCTTCAGACTATAGGGACAAACCCCCAAACACCGTAGTCTGTCCAGTCTGTCTGGGCC TCCCTGGAGCCCTCCCGAAG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSKCRELIKEFGSLKVTTTRLAILFYLMVNKWSKLGDIAKHLGLTKSTVWKHLKEMQEEGLVKVKYSLGRHPQMNVALTE KGAKLVLQYAGLLEKVIECLEGEGEKSEKGESEGVEGHEESEDRSGSTHSTDQT
Sequences:
>Translated_134_residues MSKCRELIKEFGSLKVTTTRLAILFYLMVNKWSKLGDIAKHLGLTKSTVWKHLKEMQEEGLVKVKYSLGRHPQMNVALTE KGAKLVLQYAGLLEKVIECLEGEGEKSEKGESEGVEGHEESEDRSGSTHSTDQT >Mature_133_residues SKCRELIKEFGSLKVTTTRLAILFYLMVNKWSKLGDIAKHLGLTKSTVWKHLKEMQEEGLVKVKYSLGRHPQMNVALTEK GAKLVLQYAGLLEKVIECLEGEGEKSEKGESEGVEGHEESEDRSGSTHSTDQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15007; Mature: 14876
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKCRELIKEFGSLKVTTTRLAILFYLMVNKWSKLGDIAKHLGLTKSTVWKHLKEMQEEG CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC LVKVKYSLGRHPQMNVALTEKGAKLVLQYAGLLEKVIECLEGEGEKSEKGESEGVEGHEE CEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SEDRSGSTHSTDQT CCCCCCCCCCCCCC >Mature Secondary Structure SKCRELIKEFGSLKVTTTRLAILFYLMVNKWSKLGDIAKHLGLTKSTVWKHLKEMQEEG HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC LVKVKYSLGRHPQMNVALTEKGAKLVLQYAGLLEKVIECLEGEGEKSEKGESEGVEGHEE CEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC SEDRSGSTHSTDQT CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA