| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ytpT [H]
Identifier: 154687120
GI number: 154687120
Start: 2817202
End: 2819805
Strand: Reverse
Name: ytpT [H]
Synonym: RBAM_026920
Alternate gene names: 154687120
Gene position: 2819805-2817202 (Counterclockwise)
Preceding gene: 154687121
Following gene: 154687119
Centisome position: 71.96
GC content: 51.11
Gene sequence:
>2604_bases ATGAGTTGGCTGAATAAATTTTTTGACTTATTTTTAGGTGAAAAAGAAGAAGAGCATGAACGTGAACCAAACACGCATGC CCAAATCCCGAAACAGCAGATACCGGATCAGCCAGAAGGCAAATTCACGCGCATGGAAGATCCTAAAATATATTACGAAT ATCCGAAAGGGAATTTCCGCTTCCCTGTCGTTCCGGACGGCTATAAGCGAACGGAGCAAAACCAAAGACAGCGGGAAAGG CACGAACGCCGCCAGCCGTCCCGGGATTATGCCGCCGGGAAGGAGCAAACCGAGCGGAAACAGCATACACATAAAGAGCC TGATACGGTGAAAAAGCCCTTTAAACCGTCATCCATTCCTTCACCGGTTTACGGCTTTCAATCTCAGCACAGCATAAAAA AAGCGCCTATATCCGAAAAGCGGCGTGAAGAGAACGTAACATTGCTGTCAGAGGAGCAATTTGTTCCGCCAAAAGCCGGT CAGGAAACGGAAAAAGAGCCCGTCTTCACAACATCCGGCATAACAAAACAGACGAATGACCGGCCAGACCCGTTTGCGAA ACAAGAAACGGAAGAAATCCCGGCCGTTAAAAAAGAGGAGCTTCACACCGAGGCTGAGAATGCAAAAGAGCAAGTGTTTG CAGCAGCAGAACCGCAGCAGACTGAAGAGCGGGAGCACACGGAAAGCGCGGAGTCTGCCGGCTTTACAGAAGAACAAGAG CATGAACAAACCCGCCCGCAGCCTATTAAAGAGCCTGAGGATGAAGTATCCCGAACGGCTGAAAACTCAGAGGAACAAGC GGCGCCGCAGGAGGAATATCAGGAGCCTGAGCCGGAAAAAGCACCGCCTTTTGAAACCGCGGAAGAACCGGTGTATACAT ACACAGAACCCGGATACGATGAGGAAGTTCAGCCGCAGTCTGAAGACAAGCCCGAATCAGCTGAAACCGACGCGAAACAG GAAACAGACTCTCAGCCTGAGTACAATGAAGTCACGCGGCATTCAGACCCCGAGCCTGAACCTGCAAGCATCAAGACGGC CGATGCCCCGTCCCGGCCTGCCGAAGAAAAAACGGAGCATCACGGACAGCCTCAGACTGTGAGAAAAGCGGAGCGGCCGA AAGAGCGCAATGTTCCGTTTAACGTCATGATGCTTAAAAGTGATAAACACAAGCAGACGAAGACGCCAGAGGGCGGAGCG AGCTATGCCTTTCCGAATCTGTCGCTTCTGGACGTACCGCCGGCGCAAAGACATGACGACCAATCGTGGATTGAAGAACA GCGCGAGCTTTTAAACGTTACACTGAAAAACTTTAATGTGCGCGCCCAAGTCGTTCATGTCACACAAGGCCCGTCCGTCA CACGTTTTGAAGTGCATCCTGAGCCCGGAGTGAAAGTAAACAAAATTACAAACTTAGCAGATGATATTAAATTGAGCCTG TCTGCCAAGGATATTCGGATTGAGGCGCCGATCCCCGGTAAAAACACGATCGGCATTGAAGTTCCGAACCGCGTAAGCAA AGTCGTCGATTTAAGGCAGATGATCAGAAGCGCCGCTTTCAGGACGAATCCGTCTCCGCTTACAGCCGCACTCGGTGTCG ATATTTCCGGAAACCCGGTCGTCATTGATTTGAAAAAGATGCCGCACGGGTTGATAGCGGGTGCGACAGGATCGGGAAAA AGCGTCTGCATCAATACCATTTTGGTCAGTCTGCTTTATAAGGCGGATCCGAGTGATGTCAAAATGCTTCTGATTGATCC GAAAATGGTCGAGCTTGCGCCTTATAACCAAATTCCGCATTTGGTCAGCCCCGTCATCACGGACGCCAAAGCCGCGACCG CCGCGTTAAAATGGGTTGTGGAAGAGATGGAACGGCGATATGAACTGTTTGCCCATTCGGGTGTGAGAGATATCGGCCGC TTTAATGAATTAACCGCCGATCATAAGACAGGCGAAAAGCTTCCGTACCTCGTAGTGGTCATTGATGAGCTTGCCGATTT AATGATGGTCGCGCCGAACGATGTGGAAGAAAGCATTGCCAGAATCGCGCAGAAAGCGAGAGCCTGCGGCATTCATCTGC TTGTCGCGACACAGCGTCCGTCTGTCGATGTCATTACCGGAATGATCAAGGCAAACATACCGACGAGGATTGCATTCTCC GTCTCAAGCCAGGTAGATTCCAGAACAATCATCGACATGGCGGGAGCGGAAAAGCTGCTCGGAAAAGGCGACATGCTGTA CTGGGAAAACGGTACCGGAAAACCGGTGCGCCTGCAAGGCAACTTTGTATCCGACAGAGAAATTGACCGCGTCGTCTCTC ATGTCAGAAAGCAGCTGCCGCCTTCTTATTTGTTTGAACAGGAAGAACTGATCAGGCAGGGAACCGCCCTCAAGGAAGAA GACGAACTGTTTCCTGAGGCGTGCCAATTCGTCGTGGAGCAAAACAGCGCCAGCACCTCAAGCCTTCAAAGAAGGTTCAG AATCGGTTATAACCGCGCCGCGAGGCTGATTGACATGATGGAAGCCGAAGGCATGATCTCAGAAGCGAAGGGCAGCAAAC CCCGTGAAGTGCTGATTACGGCCGCTGACATTGCTCAAGAATAA
Upstream 100 bases:
>100_bases CTTTCTTCAGTTGGGAGCTTAATCTTTTCTGAGCCGCCCGGCAATGGTATACTAAATATCGTCCCAGACTACTAAAAAGG GAGTTAGAGAGTGATTAAAC
Downstream 100 bases:
>100_bases GAATATCGTTCATTTTTCTCACAAACATGGTATGATAGTGGATGGACCATCAAAACTGCATCACTGTCACGCGCTGAAAT ATCATGCGGCAGGTTTAATC
Product: YtpT
Products: NA
Alternate protein names: Septum-associated ftsK-like translocase of DNA [H]
Number of amino acids: Translated: 867; Mature: 866
Protein sequence:
>867_residues MSWLNKFFDLFLGEKEEEHEREPNTHAQIPKQQIPDQPEGKFTRMEDPKIYYEYPKGNFRFPVVPDGYKRTEQNQRQRER HERRQPSRDYAAGKEQTERKQHTHKEPDTVKKPFKPSSIPSPVYGFQSQHSIKKAPISEKRREENVTLLSEEQFVPPKAG QETEKEPVFTTSGITKQTNDRPDPFAKQETEEIPAVKKEELHTEAENAKEQVFAAAEPQQTEEREHTESAESAGFTEEQE HEQTRPQPIKEPEDEVSRTAENSEEQAAPQEEYQEPEPEKAPPFETAEEPVYTYTEPGYDEEVQPQSEDKPESAETDAKQ ETDSQPEYNEVTRHSDPEPEPASIKTADAPSRPAEEKTEHHGQPQTVRKAERPKERNVPFNVMMLKSDKHKQTKTPEGGA SYAFPNLSLLDVPPAQRHDDQSWIEEQRELLNVTLKNFNVRAQVVHVTQGPSVTRFEVHPEPGVKVNKITNLADDIKLSL SAKDIRIEAPIPGKNTIGIEVPNRVSKVVDLRQMIRSAAFRTNPSPLTAALGVDISGNPVVIDLKKMPHGLIAGATGSGK SVCINTILVSLLYKADPSDVKMLLIDPKMVELAPYNQIPHLVSPVITDAKAATAALKWVVEEMERRYELFAHSGVRDIGR FNELTADHKTGEKLPYLVVVIDELADLMMVAPNDVEESIARIAQKARACGIHLLVATQRPSVDVITGMIKANIPTRIAFS VSSQVDSRTIIDMAGAEKLLGKGDMLYWENGTGKPVRLQGNFVSDREIDRVVSHVRKQLPPSYLFEQEELIRQGTALKEE DELFPEACQFVVEQNSASTSSLQRRFRIGYNRAARLIDMMEAEGMISEAKGSKPREVLITAADIAQE
Sequences:
>Translated_867_residues MSWLNKFFDLFLGEKEEEHEREPNTHAQIPKQQIPDQPEGKFTRMEDPKIYYEYPKGNFRFPVVPDGYKRTEQNQRQRER HERRQPSRDYAAGKEQTERKQHTHKEPDTVKKPFKPSSIPSPVYGFQSQHSIKKAPISEKRREENVTLLSEEQFVPPKAG QETEKEPVFTTSGITKQTNDRPDPFAKQETEEIPAVKKEELHTEAENAKEQVFAAAEPQQTEEREHTESAESAGFTEEQE HEQTRPQPIKEPEDEVSRTAENSEEQAAPQEEYQEPEPEKAPPFETAEEPVYTYTEPGYDEEVQPQSEDKPESAETDAKQ ETDSQPEYNEVTRHSDPEPEPASIKTADAPSRPAEEKTEHHGQPQTVRKAERPKERNVPFNVMMLKSDKHKQTKTPEGGA SYAFPNLSLLDVPPAQRHDDQSWIEEQRELLNVTLKNFNVRAQVVHVTQGPSVTRFEVHPEPGVKVNKITNLADDIKLSL SAKDIRIEAPIPGKNTIGIEVPNRVSKVVDLRQMIRSAAFRTNPSPLTAALGVDISGNPVVIDLKKMPHGLIAGATGSGK SVCINTILVSLLYKADPSDVKMLLIDPKMVELAPYNQIPHLVSPVITDAKAATAALKWVVEEMERRYELFAHSGVRDIGR FNELTADHKTGEKLPYLVVVIDELADLMMVAPNDVEESIARIAQKARACGIHLLVATQRPSVDVITGMIKANIPTRIAFS VSSQVDSRTIIDMAGAEKLLGKGDMLYWENGTGKPVRLQGNFVSDREIDRVVSHVRKQLPPSYLFEQEELIRQGTALKEE DELFPEACQFVVEQNSASTSSLQRRFRIGYNRAARLIDMMEAEGMISEAKGSKPREVLITAADIAQE >Mature_866_residues SWLNKFFDLFLGEKEEEHEREPNTHAQIPKQQIPDQPEGKFTRMEDPKIYYEYPKGNFRFPVVPDGYKRTEQNQRQRERH ERRQPSRDYAAGKEQTERKQHTHKEPDTVKKPFKPSSIPSPVYGFQSQHSIKKAPISEKRREENVTLLSEEQFVPPKAGQ ETEKEPVFTTSGITKQTNDRPDPFAKQETEEIPAVKKEELHTEAENAKEQVFAAAEPQQTEEREHTESAESAGFTEEQEH EQTRPQPIKEPEDEVSRTAENSEEQAAPQEEYQEPEPEKAPPFETAEEPVYTYTEPGYDEEVQPQSEDKPESAETDAKQE TDSQPEYNEVTRHSDPEPEPASIKTADAPSRPAEEKTEHHGQPQTVRKAERPKERNVPFNVMMLKSDKHKQTKTPEGGAS YAFPNLSLLDVPPAQRHDDQSWIEEQRELLNVTLKNFNVRAQVVHVTQGPSVTRFEVHPEPGVKVNKITNLADDIKLSLS AKDIRIEAPIPGKNTIGIEVPNRVSKVVDLRQMIRSAAFRTNPSPLTAALGVDISGNPVVIDLKKMPHGLIAGATGSGKS VCINTILVSLLYKADPSDVKMLLIDPKMVELAPYNQIPHLVSPVITDAKAATAALKWVVEEMERRYELFAHSGVRDIGRF NELTADHKTGEKLPYLVVVIDELADLMMVAPNDVEESIARIAQKARACGIHLLVATQRPSVDVITGMIKANIPTRIAFSV SSQVDSRTIIDMAGAEKLLGKGDMLYWENGTGKPVRLQGNFVSDREIDRVVSHVRKQLPPSYLFEQEELIRQGTALKEED ELFPEACQFVVEQNSASTSSLQRRFRIGYNRAARLIDMMEAEGMISEAKGSKPREVLITAADIAQE
Specific function: Required for the accurate completion of chromosome partitioning, in part by promoting efficient resolution of chromosome dimers, before the formation of the division septum. Binds to DNA in a non-specific manner. Shows ATPase activity. Not required for cy
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cytoplasm. Note=Colocalizes with ftsZ at nascent division sites [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=484, Percent_Identity=49.7933884297521, Blast_Score=461, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 97752; Mature: 97620
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLNKFFDLFLGEKEEEHEREPNTHAQIPKQQIPDQPEGKFTRMEDPKIYYEYPKGNFR CCHHHHHHHHHCCCCHHHHHCCCCCHHCCCHHHCCCCCCCCEEECCCCEEEEECCCCCEE FPVVPDGYKRTEQNQRQRERHERRQPSRDYAAGKEQTERKQHTHKEPDTVKKPFKPSSIP CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCC SPVYGFQSQHSIKKAPISEKRREENVTLLSEEQFVPPKAGQETEKEPVFTTSGITKQTND CCCCCCCCCCCHHCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCC RPDPFAKQETEEIPAVKKEELHTEAENAKEQVFAAAEPQQTEEREHTESAESAGFTEEQE CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHH HEQTRPQPIKEPEDEVSRTAENSEEQAAPQEEYQEPEPEKAPPFETAEEPVYTYTEPGYD HHHCCCCCCCCCHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC EEVQPQSEDKPESAETDAKQETDSQPEYNEVTRHSDPEPEPASIKTADAPSRPAEEKTEH CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHH HGQPQTVRKAERPKERNVPFNVMMLKSDKHKQTKTPEGGASYAFPNLSLLDVPPAQRHDD CCCCHHHHHHCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC QSWIEEQRELLNVTLKNFNVRAQVVHVTQGPSVTRFEVHPEPGVKVNKITNLADDIKLSL HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHCCHHHEEEEE SAKDIRIEAPIPGKNTIGIEVPNRVSKVVDLRQMIRSAAFRTNPSPLTAALGVDISGNPV EECEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCE VIDLKKMPHGLIAGATGSGKSVCINTILVSLLYKADPSDVKMLLIDPKMVELAPYNQIPH EEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCHH LVSPVITDAKAATAALKWVVEEMERRYELFAHSGVRDIGRFNELTADHKTGEKLPYLVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEE IDELADLMMVAPNDVEESIARIAQKARACGIHLLVATQRPSVDVITGMIKANIPTRIAFS HHHHHHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEE VSSQVDSRTIIDMAGAEKLLGKGDMLYWENGTGKPVRLQGNFVSDREIDRVVSHVRKQLP ECCCCCCCHHHHHHCHHHHHCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC PSYLFEQEELIRQGTALKEEDELFPEACQFVVEQNSASTSSLQRRFRIGYNRAARLIDMM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHH EAEGMISEAKGSKPREVLITAADIAQE HHCCHHHHHCCCCCCEEEEEHHHHCCC >Mature Secondary Structure SWLNKFFDLFLGEKEEEHEREPNTHAQIPKQQIPDQPEGKFTRMEDPKIYYEYPKGNFR CHHHHHHHHHCCCCHHHHHCCCCCHHCCCHHHCCCCCCCCEEECCCCEEEEECCCCCEE FPVVPDGYKRTEQNQRQRERHERRQPSRDYAAGKEQTERKQHTHKEPDTVKKPFKPSSIP CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHCCCCCHHHHCCCCCCCCC SPVYGFQSQHSIKKAPISEKRREENVTLLSEEQFVPPKAGQETEKEPVFTTSGITKQTND CCCCCCCCCCCHHCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCC RPDPFAKQETEEIPAVKKEELHTEAENAKEQVFAAAEPQQTEEREHTESAESAGFTEEQE CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCHHH HEQTRPQPIKEPEDEVSRTAENSEEQAAPQEEYQEPEPEKAPPFETAEEPVYTYTEPGYD HHHCCCCCCCCCHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCCCCCC EEVQPQSEDKPESAETDAKQETDSQPEYNEVTRHSDPEPEPASIKTADAPSRPAEEKTEH CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHH HGQPQTVRKAERPKERNVPFNVMMLKSDKHKQTKTPEGGASYAFPNLSLLDVPPAQRHDD CCCCHHHHHHCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC QSWIEEQRELLNVTLKNFNVRAQVVHVTQGPSVTRFEVHPEPGVKVNKITNLADDIKLSL HHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCHHHHHCCHHHEEEEE SAKDIRIEAPIPGKNTIGIEVPNRVSKVVDLRQMIRSAAFRTNPSPLTAALGVDISGNPV EECEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCE VIDLKKMPHGLIAGATGSGKSVCINTILVSLLYKADPSDVKMLLIDPKMVELAPYNQIPH EEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCHH LVSPVITDAKAATAALKWVVEEMERRYELFAHSGVRDIGRFNELTADHKTGEKLPYLVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEE IDELADLMMVAPNDVEESIARIAQKARACGIHLLVATQRPSVDVITGMIKANIPTRIAFS HHHHHHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEE VSSQVDSRTIIDMAGAEKLLGKGDMLYWENGTGKPVRLQGNFVSDREIDRVVSHVRKQLP ECCCCCCCHHHHHHCHHHHHCCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCC PSYLFEQEELIRQGTALKEEDELFPEACQFVVEQNSASTSSLQRRFRIGYNRAARLIDMM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHH EAEGMISEAKGSKPREVLITAADIAQE HHCCHHHHHCCCCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]