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The map label for this gene is ytxE [H]

Identifier: 154687112

GI number: 154687112

Start: 2810128

End: 2810817

Strand: Reverse

Name: ytxE [H]

Synonym: RBAM_026840

Alternate gene names: 154687112

Gene position: 2810817-2810128 (Counterclockwise)

Preceding gene: 154687113

Following gene: 154687108

Centisome position: 71.73

GC content: 46.52

Gene sequence:

>690_bases
ATGAAGCTTAGAAAAGAGCGTTTTGAAAGAAGAAACAAACTGGAACATTCCGGCGGTTCACCGAGATGGATGGTGACGTT
CGCTGACTTGATCACGCTCATTCTCGTGTTCTTTATATTGCTTTTTTCGATGTCGCAAATAGACGCGGAAAAATTTCAAT
CTGCCGTTTCATCGATTCATACAAACGGCAGCGGGGGTGAACCGGCGTCATCAGACAAAGCAAACGAAAATAAAGAACAG
GATTTGCTGTTACAAAACGTGAAGACATACATAAAAGCGCATCATTTGAGTTCGAAATTGACGGCGAAGCGCGATGAGCG
CGGAGTGGTTCTGGTGCTTCAGGAGGCCGTTCTGTTTCAGACAGGAAAAGCGGATGTGCTGAAAAACGCCGAGCCGGTTC
TGCATCAGATCGCGGTGCTTTTAAAAACAATTCCGAATGACATACAGGTAGAAGGCCATACGGACAGCCGCCGGATTTCC
ACCTATCAATTTCCGTCAAATTGGGAGCTGTCGTCTGCAAGAGCGGCGAGTGTGATCCGGTATTTTACCGCGAATGAAGA
CTTTTCCGCCAAACGGTTTATCTCTGCCGGGTATGCGGATACGAAACCTGTGAAGGACAACAAAAGTCCCGGACATATGA
AAGAAAACCGCCGTGTAGAAATTGTGATCAAAAAAACGACCTCCTCATAA

Upstream 100 bases:

>100_bases
GGCAAAAATCCCCGCAACCTCGAAAGTCAGCTCGTCGTCTTCAGCTCAAGAGAAGACTGGCGTAAAGGACAGCCTGCGAG
CAAGAAAAAGGGCGCTGTCC

Downstream 100 bases:

>100_bases
GGTCGTTTTTTATTTAGTTTTATACCGCTGCTCAGACCGGATGGCAAAAAGCGCTTTTTCCACGGTTTGGGCATTTTTTT
CTGAAATTTCTTCTTTGCGG

Product: flagellar motor protein MotS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKLRKERFERRNKLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEPASSDKANENKEQ
DLLLQNVKTYIKAHHLSSKLTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRIS
TYQFPSNWELSSARAASVIRYFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIKKTTSS

Sequences:

>Translated_229_residues
MKLRKERFERRNKLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEPASSDKANENKEQ
DLLLQNVKTYIKAHHLSSKLTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRIS
TYQFPSNWELSSARAASVIRYFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIKKTTSS
>Mature_229_residues
MKLRKERFERRNKLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIHTNGSGGEPASSDKANENKEQ
DLLLQNVKTYIKAHHLSSKLTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRIS
TYQFPSNWELSSARAASVIRYFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIKKTTSS

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=266, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 25789; Mature: 25789

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRKERFERRNKLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIH
CCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
TNGSGGEPASSDKANENKEQDLLLQNVKTYIKAHHLSSKLTAKRDERGVVLVLQEAVLFQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHC
TGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRISTYQFPSNWELSSARAASVIR
CCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
YFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIKKTTSS
HHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure
MKLRKERFERRNKLEHSGGSPRWMVTFADLITLILVFFILLFSMSQIDAEKFQSAVSSIH
CCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
TNGSGGEPASSDKANENKEQDLLLQNVKTYIKAHHLSSKLTAKRDERGVVLVLQEAVLFQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHC
TGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRISTYQFPSNWELSSARAASVIR
CCCHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHH
YFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRVEIVIKKTTSS
HHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]