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The map label for this gene is ytxD [H]

Identifier: 154687113

GI number: 154687113

Start: 2810807

End: 2811622

Strand: Reverse

Name: ytxD [H]

Synonym: RBAM_026850

Alternate gene names: 154687113

Gene position: 2811622-2810807 (Counterclockwise)

Preceding gene: 154687114

Following gene: 154687112

Centisome position: 71.75

GC content: 50.0

Gene sequence:

>816_bases
ATGAAACGTTTTGATTATCTGACGCCCGTTGGCTTTATGTTAGGCTGTATTATTGTCGCAATCGGTATTCTGTCAGGGAC
GGGACTGGCGGGAATCAGTTCATTTTTAGATCTGACTTCTTTTTTAATCGTCACAGGCGGCCTTGCTGCGGCGATCTTTA
TCAGCTTTCCGCCGAGGGATTTAAAGAAAACCCCTTCTGTTCTGAAACAGGTATTCTCCCGTCAGGATGACAATGTGAAA
GAGCTTGTCAGAGTATTTGTCAGCCTTTCGGAGCAGGCGCGCAGGCAGGGGCTTCTGTCTCTGGATGACCAGGCGCGTGA
GATCAAGGATCCGTTTTTAAAAAAAGGGCTTTTGCTTGCGATTGACGGCTGGGACGAGGAAACGATCCGGCTGGTGATGG
ATTCTGAGATCGCCGCGATGGAAGAAAGACACAGAAAAGGTAGACGCGTTTTTGAAAAAGCCGGTGATTTCGCACCCGCC
TGGGGAATGATCGGGACGCTCGTCGGACTCGTTCTCATGCTCAAAAACTTAAATGACCCGCATACCCTCGGACCGAACAT
GGCTGTTGCGCTATTGACGACGCTGTACGGAGCGCTGCTTGCCAACTTGGTGTTTATCCCAATCGCGGCAAAGCTTGAAG
AAAAAACGGAAAGTGAAATTTTCATCAAACAGGTCATGATCGAAGGGGTTGTCGGCATCCAATCGGGCAAAAATCCCCGC
AACCTCGAAAGTCAGCTCGTCGTCTTCAGCTCAAGAGAAGACTGGCGTAAAGGACAGCCTGCGAGCAAGAAAAAGGGCGC
TGTCCATGAAGCTTAG

Upstream 100 bases:

>100_bases
GCATCGAATTAAGACAATCAACCAAGTCATAAAAAAACGGAAAAGCAAGCTTCACTCTGAGGGGTGGAATCTTGCTTTTT
TACTTGAGTAAGGAGAAGAT

Downstream 100 bases:

>100_bases
AAAAGAGCGTTTTGAAAGAAGAAACAAACTGGAACATTCCGGCGGTTCACCGAGATGGATGGTGACGTTCGCTGACTTGA
TCACGCTCATTCTCGTGTTC

Product: flagellar motor protein MotP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKRFDYLTPVGFMLGCIIVAIGILSGTGLAGISSFLDLTSFLIVTGGLAAAIFISFPPRDLKKTPSVLKQVFSRQDDNVK
ELVRVFVSLSEQARRQGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPA
WGMIGTLVGLVLMLKNLNDPHTLGPNMAVALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIEGVVGIQSGKNPR
NLESQLVVFSSREDWRKGQPASKKKGAVHEA

Sequences:

>Translated_271_residues
MKRFDYLTPVGFMLGCIIVAIGILSGTGLAGISSFLDLTSFLIVTGGLAAAIFISFPPRDLKKTPSVLKQVFSRQDDNVK
ELVRVFVSLSEQARRQGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPA
WGMIGTLVGLVLMLKNLNDPHTLGPNMAVALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIEGVVGIQSGKNPR
NLESQLVVFSSREDWRKGQPASKKKGAVHEA
>Mature_271_residues
MKRFDYLTPVGFMLGCIIVAIGILSGTGLAGISSFLDLTSFLIVTGGLAAAIFISFPPRDLKKTPSVLKQVFSRQDDNVK
ELVRVFVSLSEQARRQGLLSLDDQAREIKDPFLKKGLLLAIDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPA
WGMIGTLVGLVLMLKNLNDPHTLGPNMAVALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIEGVVGIQSGKNPR
NLESQLVVFSSREDWRKGQPASKKKGAVHEA

Specific function: May be involved in some transport function [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFDYLTPVGFMLGCIIVAIGILSGTGLAGISSFLDLTSFLIVTGGLAAAIFISFPPRD
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHH
LKKTPSVLKQVFSRQDDNVKELVRVFVSLSEQARRQGLLSLDDQAREIKDPFLKKGLLLA
HHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEE
IDGWDEETIRLVMDSEIAAMEERHRKGRRVFEKAGDFAPAWGMIGTLVGLVLMLKNLNDP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
HTLGPNMAVALLTTLYGALLANLVFIPIAAKLEEKTESEIFIKQVMIEGVVGIQSGKNPR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NLESQLVVFSSREDWRKGQPASKKKGAVHEA
CCHHHEEEECCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure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CCHHHEEEECCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]