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The map label for this gene is araN [H]

Identifier: 154687009

GI number: 154687009

Start: 2705233

End: 2706528

Strand: Reverse

Name: araN [H]

Synonym: RBAM_025810

Alternate gene names: 154687009

Gene position: 2706528-2705233 (Counterclockwise)

Preceding gene: 154687010

Following gene: 154687008

Centisome position: 69.07

GC content: 48.23

Gene sequence:

>1296_bases
ATGAAAAAAACGACCGCTGTATGTTTGGTGCTGATGATGCTCTTCTTGTTTACCGCCGGCTGTTCACAAGAACGGACTGC
CGGCCGGCCGGGAGAAACGGAGCTGACGTTTTGGACGTTTAACGGTCTGCACGAACAGTTTTATCAGGAAATGGTCAAAG
AATGGAATCAGAAATATCCGGATCGCAAAATCAAGCTGAATACCGTTGTTTATCCTTATGGACAAATGCATGATAATTTA
TCGGTTTCGCTGATCGCGGGTGAGGGGCTTCCCGATATAGCCGACGTGGAATTAAGCCGGTTCTCGAACTTTCTGAAGGG
GAAGGATATCCCGCTTGCCGATCTGACGCCGCTGATTGAAAAAGACCGAGATAAGTTTGTGGAAGCGCGTCTGGCATTGT
ACAGCAAAAACGGAAAATTGTACGGCCTTGATACACATGTGGGGACGACCGTCATGTTTTACAACATGGATATCATGAAA
AAAGCGGGCGTTGATCCCGCCTCCATTAAGACATGGGAAGATTACCGGCGGGCAGGGAAAAAAGTGCGTGAAGCCGCTGG
AAAACCGATGGGAACGGTTGAAACAAACGACTCCGCCACATTCCTATCCATGATTTCACAGCAAGGGTCAGGCTACTACA
GCAAAAACGGAAAATTGATTCTGAACAGCAAGACGAATACAGACACACTGAATTATGTAAAGGACATGGTAAATGATAAA
ACCCTTCTGCCGGCTCCCGGCGGCGGCCATCACAGCGAAGAATACTACGGTTTTATGAATCAGGGCGGGGCAGCCTCAGT
GCTGATGCCCATTTGGTACATGGGACGGTTTATCGATTATATGCCTGATTTAAAAGGAAAAATGGCGATTTACCCTATGC
CGGCCTGGAAAGAAGGCGGTGACAGATCAGCGGGTTTAGGCGGAACGGCCACCGTCGTGCCGAAGCAGGCTGAACATCTG
AAGCTCGCGAAAGAATTTCTCGGTTTTGCGAAAGGTTCGAAGGAAGGGAACATAAAGCTTTGGACGGTGCTCGGCTTTGA
CCCGCTCCGCTGGGACGTGTGGGATTCAAAAGAATTGAAGGAGAAAAACAAGTACACGGATTTCTTCCGGAACGGTACGT
CAATTTTTTCCTCGCTCCTTGAAATAAAAGATGAGATCAATCCGATTTATCTGCATGAAGACTTCTCTAAAGCGGCTGAT
CTCGTTGTCAGACAAGTGCTGTTCGATGCGCTGAAGACGCAGGAAAAAACACCTAAGGAAGCCTTGGACGAGGCGGCAGA
GCAATTAGAGAAATAG

Upstream 100 bases:

>100_bases
GACCGTTATACCGGTTTAACCATCATAAATGAAAATGCAGCGCTCTTTGCACATCATTTGCATCAATAGCCGCACGGCCT
AAAGTGGAAGGGGTAATGAC

Downstream 100 bases:

>100_bases
GAGAAGCCGCCCTATTTAACAGTGAAAGCGGGGGAGCTTTTATGAGACCTGTAAAGACAGAGACAGCGCAAACCGTTTCT
GCAGTCCGGAAGAAGCCGCG

Product: AraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKKTTAVCLVLMMLFLFTAGCSQERTAGRPGETELTFWTFNGLHEQFYQEMVKEWNQKYPDRKIKLNTVVYPYGQMHDNL
SVSLIAGEGLPDIADVELSRFSNFLKGKDIPLADLTPLIEKDRDKFVEARLALYSKNGKLYGLDTHVGTTVMFYNMDIMK
KAGVDPASIKTWEDYRRAGKKVREAAGKPMGTVETNDSATFLSMISQQGSGYYSKNGKLILNSKTNTDTLNYVKDMVNDK
TLLPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKMAIYPMPAWKEGGDRSAGLGGTATVVPKQAEHL
KLAKEFLGFAKGSKEGNIKLWTVLGFDPLRWDVWDSKELKEKNKYTDFFRNGTSIFSSLLEIKDEINPIYLHEDFSKAAD
LVVRQVLFDALKTQEKTPKEALDEAAEQLEK

Sequences:

>Translated_431_residues
MKKTTAVCLVLMMLFLFTAGCSQERTAGRPGETELTFWTFNGLHEQFYQEMVKEWNQKYPDRKIKLNTVVYPYGQMHDNL
SVSLIAGEGLPDIADVELSRFSNFLKGKDIPLADLTPLIEKDRDKFVEARLALYSKNGKLYGLDTHVGTTVMFYNMDIMK
KAGVDPASIKTWEDYRRAGKKVREAAGKPMGTVETNDSATFLSMISQQGSGYYSKNGKLILNSKTNTDTLNYVKDMVNDK
TLLPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKMAIYPMPAWKEGGDRSAGLGGTATVVPKQAEHL
KLAKEFLGFAKGSKEGNIKLWTVLGFDPLRWDVWDSKELKEKNKYTDFFRNGTSIFSSLLEIKDEINPIYLHEDFSKAAD
LVVRQVLFDALKTQEKTPKEALDEAAEQLEK
>Mature_431_residues
MKKTTAVCLVLMMLFLFTAGCSQERTAGRPGETELTFWTFNGLHEQFYQEMVKEWNQKYPDRKIKLNTVVYPYGQMHDNL
SVSLIAGEGLPDIADVELSRFSNFLKGKDIPLADLTPLIEKDRDKFVEARLALYSKNGKLYGLDTHVGTTVMFYNMDIMK
KAGVDPASIKTWEDYRRAGKKVREAAGKPMGTVETNDSATFLSMISQQGSGYYSKNGKLILNSKTNTDTLNYVKDMVNDK
TLLPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKMAIYPMPAWKEGGDRSAGLGGTATVVPKQAEHL
KLAKEFLGFAKGSKEGNIKLWTVLGFDPLRWDVWDSKELKEKNKYTDFFRNGTSIFSSLLEIKDEINPIYLHEDFSKAAD
LVVRQVLFDALKTQEKTPKEALDEAAEQLEK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48563; Mature: 48563

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTAVCLVLMMLFLFTAGCSQERTAGRPGETELTFWTFNGLHEQFYQEMVKEWNQKYP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC
DRKIKLNTVVYPYGQMHDNLSVSLIAGEGLPDIADVELSRFSNFLKGKDIPLADLTPLIE
CCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KDRDKFVEARLALYSKNGKLYGLDTHVGTTVMFYNMDIMKKAGVDPASIKTWEDYRRAGK
HHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEEEHHHHHHCCCCCHHCCCHHHHHHHHH
KVREAAGKPMGTVETNDSATFLSMISQQGSGYYSKNGKLILNSKTNTDTLNYVKDMVNDK
HHHHHHCCCCCCEECCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCC
TLLPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKMAIYPMPAWKEGG
EEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
DRSAGLGGTATVVPKQAEHLKLAKEFLGFAKGSKEGNIKLWTVLGFDPLRWDVWDSKELK
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCCCCHHHH
EKNKYTDFFRNGTSIFSSLLEIKDEINPIYLHEDFSKAADLVVRQVLFDALKTQEKTPKE
HHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHH
ALDEAAEQLEK
HHHHHHHHHCC
>Mature Secondary Structure
MKKTTAVCLVLMMLFLFTAGCSQERTAGRPGETELTFWTFNGLHEQFYQEMVKEWNQKYP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC
DRKIKLNTVVYPYGQMHDNLSVSLIAGEGLPDIADVELSRFSNFLKGKDIPLADLTPLIE
CCEEEEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KDRDKFVEARLALYSKNGKLYGLDTHVGTTVMFYNMDIMKKAGVDPASIKTWEDYRRAGK
HHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEEEHHHHHHCCCCCHHCCCHHHHHHHHH
KVREAAGKPMGTVETNDSATFLSMISQQGSGYYSKNGKLILNSKTNTDTLNYVKDMVNDK
HHHHHHCCCCCCEECCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCHHHHHHHHHHCCC
TLLPAPGGGHHSEEYYGFMNQGGAASVLMPIWYMGRFIDYMPDLKGKMAIYPMPAWKEGG
EEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
DRSAGLGGTATVVPKQAEHLKLAKEFLGFAKGSKEGNIKLWTVLGFDPLRWDVWDSKELK
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCCCCHHHH
EKNKYTDFFRNGTSIFSSLLEIKDEINPIYLHEDFSKAADLVVRQVLFDALKTQEKTPKE
HHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHH
ALDEAAEQLEK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]