Click here to switch to the map view.

The map label for this gene is spoIVFB [H]

Identifier: 154686932

GI number: 154686932

Start: 2620468

End: 2621334

Strand: Reverse

Name: spoIVFB [H]

Synonym: RBAM_025020

Alternate gene names: 154686932

Gene position: 2621334-2620468 (Counterclockwise)

Preceding gene: 154686933

Following gene: 154686931

Centisome position: 66.89

GC content: 49.71

Gene sequence:

>867_bases
ATGAATAAATGGCTCATCCTCCTTTTTAAAATTCATGTCCATCCTTTTCTTTGGATTATCATGGGGCTTGGTCTTATGAC
GGGGCACATCAAAGCGCTGCTGTGTCTTTTGCTGGTCGTATCCGTTCATGAGCTGGGGCATGCTGCTCTGGCTGTGTTTT
TTTCGTGGCGCATTAAACGAATCTTTCTGCTCCCTTTCGGCGGGACGGTTGAGGTGGAGGAGCACGGAAACCGGCCGCTT
AAAGAGGAATTCGCGGTCATTCTGGCGGGCCCGCTTCAGCATGTGTGGCTTCAGGCGGCAGCCTGGCTCTTTTTCATGTC
AGGCTTTGCAAGTGAGCAGACATTTGAGATGTTTACCTTTTATAATCTCTCCATTCTTTTCATCAATCTTTTGCCGATCT
GGCCGCTTGACGGCGGAAAGTTCGTGTTTTTATACTTCTCTAAACAAATGGCTTTTCAAAAAGCGCATCTCCTCAGCCTG
CAGACATCAGCCGTTTCCGCGCTTTTGCTCTGCTGCTGGATTGTGCTGGCCGTCCCCCTTCAGGTCAGCGCATGGGTGCT
GTTCGTCTTTCTCGCCGCTTCTTTATGGGATGAATACCGGAAGCGGCATTATATTCAGCTGAGGTTTCTTTTGGAGAGAT
ACTACGGCAAAAACCGCGATGTCGCCATGCTGCATCCTTTGACGGTCGCGGCCGATGCCAAAGTAAAGCATGTCATGGCC
GAATTCAAACGGGGATGCAAGCACCCCATTATCGTTGAAAAAGCCGGCGAAAAGCTCAGCCAGCTCGATGAAAATGAAGT
GCTTCATGCGTATTTTGCCGATAAACGGACAGATTCCTCTATGGAAGACCTGCTGCTGCCTTACTAG

Upstream 100 bases:

>100_bases
ATCGGTTCGATCAAGCTCAACGATAAAAGTAAAGGCCAGTACTATTTCGCGATCCAGGATGGCGATAAATTCATAGATCC
GATCCAGGTGATCACATTTG

Downstream 100 bases:

>100_bases
AAATAGATTGACATATCCTTTTGGTTCTGATATATTTTTTAATGTTATGGATGTAGCACCAATGCTACAACCGCTCGGGA
CAGGTGATAAGAGCTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAALAVFFSWRIKRIFLLPFGGTVEVEEHGNRPL
KEEFAVILAGPLQHVWLQAAAWLFFMSGFASEQTFEMFTFYNLSILFINLLPIWPLDGGKFVFLYFSKQMAFQKAHLLSL
QTSAVSALLLCCWIVLAVPLQVSAWVLFVFLAASLWDEYRKRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMA
EFKRGCKHPIIVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY

Sequences:

>Translated_288_residues
MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAALAVFFSWRIKRIFLLPFGGTVEVEEHGNRPL
KEEFAVILAGPLQHVWLQAAAWLFFMSGFASEQTFEMFTFYNLSILFINLLPIWPLDGGKFVFLYFSKQMAFQKAHLLSL
QTSAVSALLLCCWIVLAVPLQVSAWVLFVFLAASLWDEYRKRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMA
EFKRGCKHPIIVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY
>Mature_288_residues
MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAALAVFFSWRIKRIFLLPFGGTVEVEEHGNRPL
KEEFAVILAGPLQHVWLQAAAWLFFMSGFASEQTFEMFTFYNLSILFINLLPIWPLDGGKFVFLYFSKQMAFQKAHLLSL
QTSAVSALLLCCWIVLAVPLQVSAWVLFVFLAASLWDEYRKRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMA
EFKRGCKHPIIVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY

Specific function: Implicated in the coupling of mother cell to forespore gene expression. Required for spore formation. Processes the pro- sigma K factor [H]

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Forespore outer membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 33181; Mature: 33181

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAALAVFFSWRIKR
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IFLLPFGGTVEVEEHGNRPLKEEFAVILAGPLQHVWLQAAAWLFFMSGFASEQTFEMFTF
EEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YNLSILFINLLPIWPLDGGKFVFLYFSKQMAFQKAHLLSLQTSAVSALLLCCWIVLAVPL
HHHHHHHEEHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSAWVLFVFLAASLWDEYRKRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEECCHHHHHHHH
EFKRGCKHPIIVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY
HHHHCCCCCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure
MNKWLILLFKIHVHPFLWIIMGLGLMTGHIKALLCLLLVVSVHELGHAALAVFFSWRIKR
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IFLLPFGGTVEVEEHGNRPLKEEFAVILAGPLQHVWLQAAAWLFFMSGFASEQTFEMFTF
EEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
YNLSILFINLLPIWPLDGGKFVFLYFSKQMAFQKAHLLSLQTSAVSALLLCCWIVLAVPL
HHHHHHHEEHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSAWVLFVFLAASLWDEYRKRHYIQLRFLLERYYGKNRDVAMLHPLTVAADAKVKHVMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEECCHHHHHHHH
EFKRGCKHPIIVEKAGEKLSQLDENEVLHAYFADKRTDSSMEDLLLPY
HHHHCCCCCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 10809718 [H]