Click here to switch to the map view.

The map label for this gene is spoIVFA [H]

Identifier: 154686933

GI number: 154686933

Start: 2621327

End: 2622130

Strand: Reverse

Name: spoIVFA [H]

Synonym: RBAM_025030

Alternate gene names: 154686933

Gene position: 2622130-2621327 (Counterclockwise)

Preceding gene: 154686934

Following gene: 154686932

Centisome position: 66.92

GC content: 47.01

Gene sequence:

>804_bases
ATGAGTCACAGAGCTGATGAAATTAGAAAAAGACTGGCCAAAAGAAGAAAACAGCGGCCTGAATCAAAACGGACTTTCGT
TCAAAACGCCCAAACGCAGAATTTTCCCGCGTGGCAGACGGTCAAGGAGCAGGAAAAGCACAAACTTCTTCCGGACTACG
AATATCAAACGGAACACCCGCCCGAATTTAACGGACGGCATCCATTGATCAGCGCTCATTCTATTATTTTAAAATGCCTG
CTGGCCGCCTGTCTCGTACTGATCTCCGCTATTGCCTATAAAACTGACAAACAGCCGCTGAGTCAGATCAAACCGGCGAT
CGCACAAACCTTTCAAAAAGAATTTCAGTTTGCTGCCGTAAGCAATTGGTTCGTATCTTCCTTCGGAAACCCGCTCGCTT
TTCTTACGCCGGGAACGAAAAAGAAGGACGGTCAGGTGGCGGTCAGTCAGGATATGGCCGTTCCTGCCGCGGGGAAAATC
CAGCAGGACTTTCAAAATAACGGAGAAGGCGTCGTCGTCGAAACCGCCAGCGAAGCCATTGACAGCGTAAAAGAAGGCTA
CATTATGGAAGTGAGCAAAGATAAAAAAACAGGGCTGACGGTGAAGGTGCAGCACGCCGACAATACCAGCAGCATTTACG
GCCGGCTAAAAGATGTTAACGTTTCATTGTACGACTTTGTCGATAAAGGGAAAAAGATCGGTTCGATCAAGCTCAACGAT
AAAAGTAAAGGCCAGTACTATTTCGCGATCCAGGATGGCGATAAATTCATAGATCCGATCCAGGTGATCACATTTGATGA
ATAA

Upstream 100 bases:

>100_bases
AAGCCCAGCTTATCAGGTCTTTTTTGTTTTTCAAGAGCGCATATTTGCAATGGACAAGACATAGGATGTACAAACCCAAC
GATTGCAAAGGATGATGGCG

Downstream 100 bases:

>100_bases
ATGGCTCATCCTCCTTTTTAAAATTCATGTCCATCCTTTTCTTTGGATTATCATGGGGCTTGGTCTTATGACGGGGCACA
TCAAAGCGCTGCTGTGTCTT

Product: SpoIVFA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSHRADEIRKRLAKRRKQRPESKRTFVQNAQTQNFPAWQTVKEQEKHKLLPDYEYQTEHPPEFNGRHPLISAHSIILKCL
LAACLVLISAIAYKTDKQPLSQIKPAIAQTFQKEFQFAAVSNWFVSSFGNPLAFLTPGTKKKDGQVAVSQDMAVPAAGKI
QQDFQNNGEGVVVETASEAIDSVKEGYIMEVSKDKKTGLTVKVQHADNTSSIYGRLKDVNVSLYDFVDKGKKIGSIKLND
KSKGQYYFAIQDGDKFIDPIQVITFDE

Sequences:

>Translated_267_residues
MSHRADEIRKRLAKRRKQRPESKRTFVQNAQTQNFPAWQTVKEQEKHKLLPDYEYQTEHPPEFNGRHPLISAHSIILKCL
LAACLVLISAIAYKTDKQPLSQIKPAIAQTFQKEFQFAAVSNWFVSSFGNPLAFLTPGTKKKDGQVAVSQDMAVPAAGKI
QQDFQNNGEGVVVETASEAIDSVKEGYIMEVSKDKKTGLTVKVQHADNTSSIYGRLKDVNVSLYDFVDKGKKIGSIKLND
KSKGQYYFAIQDGDKFIDPIQVITFDE
>Mature_266_residues
SHRADEIRKRLAKRRKQRPESKRTFVQNAQTQNFPAWQTVKEQEKHKLLPDYEYQTEHPPEFNGRHPLISAHSIILKCLL
AACLVLISAIAYKTDKQPLSQIKPAIAQTFQKEFQFAAVSNWFVSSFGNPLAFLTPGTKKKDGQVAVSQDMAVPAAGKIQ
QDFQNNGEGVVVETASEAIDSVKEGYIMEVSKDKKTGLTVKVQHADNTSSIYGRLKDVNVSLYDFVDKGKKIGSIKLNDK
SKGQYYFAIQDGDKFIDPIQVITFDE

Specific function: Implicated in the coupling of mother cell to forespore gene expression. Required for spore formation at 37 degrees Celsius, but not at 30 degrees Celsius. SpoIVFA plays a central role in both maintaining the SpoIVFA/BofA/SpoIVFB complex and anchoring it t

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Forespore outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 30038; Mature: 29907

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRADEIRKRLAKRRKQRPESKRTFVQNAQTQNFPAWQTVKEQEKHKLLPDYEYQTEHP
CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PEFNGRHPLISAHSIILKCLLAACLVLISAIAYKTDKQPLSQIKPAIAQTFQKEFQFAAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SNWFVSSFGNPLAFLTPGTKKKDGQVAVSQDMAVPAAGKIQQDFQNNGEGVVVETASEAI
HHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEECHHHHH
DSVKEGYIMEVSKDKKTGLTVKVQHADNTSSIYGRLKDVNVSLYDFVDKGKKIGSIKLND
HHHHCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCEECEEEECC
KSKGQYYFAIQDGDKFIDPIQVITFDE
CCCCEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure 
SHRADEIRKRLAKRRKQRPESKRTFVQNAQTQNFPAWQTVKEQEKHKLLPDYEYQTEHP
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PEFNGRHPLISAHSIILKCLLAACLVLISAIAYKTDKQPLSQIKPAIAQTFQKEFQFAAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
SNWFVSSFGNPLAFLTPGTKKKDGQVAVSQDMAVPAAGKIQQDFQNNGEGVVVETASEAI
HHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEEECHHHHH
DSVKEGYIMEVSKDKKTGLTVKVQHADNTSSIYGRLKDVNVSLYDFVDKGKKIGSIKLND
HHHHCCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCEECEEEECC
KSKGQYYFAIQDGDKFIDPIQVITFDE
CCCCEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 8459776 [H]