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The map label for this gene is yrzC [H]

Identifier: 154686893

GI number: 154686893

Start: 2582357

End: 2582773

Strand: Reverse

Name: yrzC [H]

Synonym: RBAM_024630

Alternate gene names: 154686893

Gene position: 2582773-2582357 (Counterclockwise)

Preceding gene: 154686895

Following gene: 154686892

Centisome position: 65.91

GC content: 51.8

Gene sequence:

>417_bases
TTGAAAATATCGACAAAGGGAAGATACGGGCTCACCATTATGATTGAATTGGCGAAAAAGCACGGAGACGGTCCGACGTC
GCTCAAAAGCATCGCCCAAACAAACAGCCTTTCTGAGCATTACTTGGAACAGCTTGTATCACCGCTCAGAAACGCCGGAC
TTGTAAAAAGCATCAGAGGCGCTTACGGGGGGTACGTGCTCGGGGGCCAGCCTGAAGAGATAACGGCCGGAGATATTATC
AGAGTGCTGGAAGGGCCGATCAGCCCGGTAGAAGTGCTTGAGGATGAAGAGCCTGCCAAGCGGGAGTTATGGATCCGCAT
CCGCGACGCTGTAAAAGACGTGCTGGACAGCACGACGTTAGAAGACCTTGCGAGCTACACGGACGGCGAGCAGGAAGCTT
ATATGTTCTATATTTAA

Upstream 100 bases:

>100_bases
GTTATGTTATAATAACAGTTGGTCTATAAGATACTAAACAGATTATTCATATCCATTTACTTGTATAAATTAACAATTAG
AATTGACTGGGGTGTTCATA

Downstream 100 bases:

>100_bases
ACCAGAGGTGTACAGACAATGGAACGGATTTATTTAGATCATGCCGCGACTTCCCCGATGGATGAGCGTGTGCTCGAAGA
GATGAAGCCCCATTTCTTCG

Product: YrzC

Products: NA

Alternate protein names: Cysteine metabolism repressor [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKISTKGRYGLTIMIELAKKHGDGPTSLKSIAQTNSLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGGQPEEITAGDII
RVLEGPISPVEVLEDEEPAKRELWIRIRDAVKDVLDSTTLEDLASYTDGEQEAYMFYI

Sequences:

>Translated_138_residues
MKISTKGRYGLTIMIELAKKHGDGPTSLKSIAQTNSLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGGQPEEITAGDII
RVLEGPISPVEVLEDEEPAKRELWIRIRDAVKDVLDSTTLEDLASYTDGEQEAYMFYI
>Mature_138_residues
MKISTKGRYGLTIMIELAKKHGDGPTSLKSIAQTNSLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGGQPEEITAGDII
RVLEGPISPVEVLEDEEPAKRELWIRIRDAVKDVLDSTTLEDLASYTDGEQEAYMFYI

Specific function: Master repressor of cysteine metabolism in B.subtilis. Controls the expression of genes involved either in cysteine synthesis from sulfide (cysK), sulfonates (ssu), or methionine (mccAB) or in cystine uptake (tcyP). Activity of CymR is positively regulate

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=131, Percent_Identity=32.0610687022901, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15242; Mature: 15242

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISTKGRYGLTIMIELAKKHGDGPTSLKSIAQTNSLSEHYLEQLVSPLRNAGLVKSIRG
CCCCCCCCCCHHEEEEEHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH
AYGGYVLGGQPEEITAGDIIRVLEGPISPVEVLEDEEPAKRELWIRIRDAVKDVLDSTTL
HCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
EDLASYTDGEQEAYMFYI
HHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MKISTKGRYGLTIMIELAKKHGDGPTSLKSIAQTNSLSEHYLEQLVSPLRNAGLVKSIRG
CCCCCCCCCCHHEEEEEHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH
AYGGYVLGGQPEEITAGDIIRVLEGPISPVEVLEDEEPAKRELWIRIRDAVKDVLDSTTL
HCCCEEECCCCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHH
EDLASYTDGEQEAYMFYI
HHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]