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The map label for this gene is yrvM [H]

Identifier: 154686895

GI number: 154686895

Start: 2584353

End: 2585117

Strand: Reverse

Name: yrvM [H]

Synonym: RBAM_024650

Alternate gene names: 154686895

Gene position: 2585117-2584353 (Counterclockwise)

Preceding gene: 154686896

Following gene: 154686893

Centisome position: 65.97

GC content: 47.45

Gene sequence:

>765_bases
TTGTTACATCAGTTTTCCAGAAATGAGCTAGCGATTGGAAAAGAAGGGCTGGACACGTTAAAAAACAGCACGGTGGCCGT
TCTCGGCGTCGGCGGAGTCGGTTCATTCGCAGCCGAAGCATTGGCGAGGTCCGGAGTGGGGCGGATCGTGCTTGTCGATA
AAGATGATGTTGACATTACAAACGTAAACCGCCAGCTGCATGCGCTCTTGTCGACGGTGGGACAGCCGAAAACAGACTTG
ATGAAAGCGCGGATCGCGGATATTAATCCGGATTGCGATGTCGTCGCCTTAAAAATGTTTTATACAGAAGAGACATATGA
GCAGTTCTTTGAGTATCCGCTTGATTACGTCATTGACGCGTCGGATACGATTCATTATAAAATTCATCTGATGAAAGAAT
GTCTGAAACGGAATGTTCCGCTGATTTCAAGCATGGGAGCGGCGAATAAAACAGACCCGACACGCTTTCAGATTGCTGAT
ATTTCAAAAACCCATACCGATCCGATTGCCAAAGTCGTCCGCACAAGGCTTCGCAAAGAGGGCATTAAAAAAGGCGTACA
GGTCATTTTTTCTGATGAAAGCCCGATCGTCATCCGTGAAGACGTCAGAAAAGAAGTCGGGAATGATGAAGCGAAAATCC
GCAAAGCGCAAATGCCGCCGTCTTCCAACGCCTGGGTTCCGTCAGTGGCCGGTCTGATTATGGGCGGACATGTTGTCATG
GAACTCTTAAAGGACATCGACATTAAACGGGTTAAAGATAAATAA

Upstream 100 bases:

>100_bases
AAAGCTGCAACGGCACAATTGGGACTTTATTTTTTGTGCGCTAAAACCAGCGGCTTTTTGACAAGCCGAGTTTATAAAAC
CAGAATGTGGAGTGAGGTTC

Downstream 100 bases:

>100_bases
AAAGAAAAACAGCCTTCTTCAGGAAAGGCTGTTTTTTTTATTTGAATCCGCCGTTTACACGAAAGATTTTGGCCGGTATC
AAAAAAGACAAGAACACATA

Product: YrvM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIVLVDKDDVDITNVNRQLHALLSTVGQPKTDL
MKARIADINPDCDVVALKMFYTEETYEQFFEYPLDYVIDASDTIHYKIHLMKECLKRNVPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTRLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVM
ELLKDIDIKRVKDK

Sequences:

>Translated_254_residues
MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIVLVDKDDVDITNVNRQLHALLSTVGQPKTDL
MKARIADINPDCDVVALKMFYTEETYEQFFEYPLDYVIDASDTIHYKIHLMKECLKRNVPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTRLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVM
ELLKDIDIKRVKDK
>Mature_254_residues
MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIVLVDKDDVDITNVNRQLHALLSTVGQPKTDL
MKARIADINPDCDVVALKMFYTEETYEQFFEYPLDYVIDASDTIHYKIHLMKECLKRNVPLISSMGAANKTDPTRFQIAD
ISKTHTDPIAKVVRTRLRKEGIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVM
ELLKDIDIKRVKDK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=206, Percent_Identity=39.3203883495146, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI87082356, Length=143, Percent_Identity=32.8671328671329, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787048, Length=167, Percent_Identity=31.1377245508982, Blast_Score=75, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6321790, Length=203, Percent_Identity=35.4679802955665, Blast_Score=138, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6322825, Length=200, Percent_Identity=35.5, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24582879, Length=142, Percent_Identity=32.3943661971831, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24660640, Length=129, Percent_Identity=32.5581395348837, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28156; Mature: 28156

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIVLVDKDDVDIT
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHH
NVNRQLHALLSTVGQPKTDLMKARIADINPDCDVVALKMFYTEETYEQFFEYPLDYVIDA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCHHEEECC
SDTIHYKIHLMKECLKRNVPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTRLRKE
CCCEEHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
GIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVM
HHHHHHEEEECCCCCEEEHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ELLKDIDIKRVKDK
HHHHCCCCHHCCCC
>Mature Secondary Structure
MLHQFSRNELAIGKEGLDTLKNSTVAVLGVGGVGSFAAEALARSGVGRIVLVDKDDVDIT
CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCHH
NVNRQLHALLSTVGQPKTDLMKARIADINPDCDVVALKMFYTEETYEQFFEYPLDYVIDA
HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCHHEEECC
SDTIHYKIHLMKECLKRNVPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTRLRKE
CCCEEHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
GIKKGVQVIFSDESPIVIREDVRKEVGNDEAKIRKAQMPPSSNAWVPSVAGLIMGGHVVM
HHHHHHEEEECCCCCEEEHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
ELLKDIDIKRVKDK
HHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]