| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yqhY [H]
Identifier: 154686697
GI number: 154686697
Start: 2403719
End: 2404126
Strand: Reverse
Name: yqhY [H]
Synonym: RBAM_022660
Alternate gene names: 154686697
Gene position: 2404126-2403719 (Counterclockwise)
Preceding gene: 154686698
Following gene: 154686696
Centisome position: 61.35
GC content: 46.81
Gene sequence:
>408_bases ATGGAAGACAACAGTGTGCTTAAAATGGATCATGATGAGGCTCATTTAGGCAAGGTTGAAATTGCTCCTGAGGTCATTGA AGTCATTGCCGGCATCGCCGCTTCCGAAGTTGAAGGAGTTGCTGAAATGCGCGGCAATTTCGCCACGGGCGTCGTAGAAC GCTTCGGCAAAATCAATCACGGCAAAGGCGTAAAGGTCGATTTAGCCGATGACGGGATTACCATCGACGTCTATTGCGTC GTTCAATTCGGGGTCTCGATCCCGAAAGTGGCGGCAAGCGTTCAGGAGAATATCCGCCAAACCTTATTAAACATGACGTC TCTGACCATTAATGAAATCAATATTCATATCGTCGGCATTCAATTTGACACGAAAGCCCAAGAAGTCGAAATCGACGAAG AAATGTAA
Upstream 100 bases:
>100_bases ACTGCTTGAACACGAAACATTTGTCAGCGGAGAGTTTAATACAAAGTTTTTAGAAACATATGATGTAATGGGCTCATAAT TTTTGCGGGAGGTGAATTGA
Downstream 100 bases:
>100_bases TGAGCGTATAAAAACCAAGGGGATGGGCAGCCCTTTGGTTTTTTATACGTTTCCCGTCATTTCAGGCATGAAGAAAGCCG GCTTACAAACGGCAGCCGAG
Product: YqhY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MEDNSVLKMDHDEAHLGKVEIAPEVIEVIAGIAASEVEGVAEMRGNFATGVVERFGKINHGKGVKVDLADDGITIDVYCV VQFGVSIPKVAASVQENIRQTLLNMTSLTINEINIHIVGIQFDTKAQEVEIDEEM
Sequences:
>Translated_135_residues MEDNSVLKMDHDEAHLGKVEIAPEVIEVIAGIAASEVEGVAEMRGNFATGVVERFGKINHGKGVKVDLADDGITIDVYCV VQFGVSIPKVAASVQENIRQTLLNMTSLTINEINIHIVGIQFDTKAQEVEIDEEM >Mature_135_residues MEDNSVLKMDHDEAHLGKVEIAPEVIEVIAGIAASEVEGVAEMRGNFATGVVERFGKINHGKGVKVDLADDGITIDVYCV VQFGVSIPKVAASVQENIRQTLLNMTSLTINEINIHIVGIQFDTKAQEVEIDEEM
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 14662; Mature: 14662
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDNSVLKMDHDEAHLGKVEIAPEVIEVIAGIAASEVEGVAEMRGNFATGVVERFGKINH CCCCCEEEECCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC GKGVKVDLADDGITIDVYCVVQFGVSIPKVAASVQENIRQTLLNMTSLTINEINIHIVGI CCCCEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE QFDTKAQEVEIDEEM EECCCCCEEECCCCC >Mature Secondary Structure MEDNSVLKMDHDEAHLGKVEIAPEVIEVIAGIAASEVEGVAEMRGNFATGVVERFGKINH CCCCCEEEECCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCC GKGVKVDLADDGITIDVYCVVQFGVSIPKVAASVQENIRQTLLNMTSLTINEINIHIVGI CCCCEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEE QFDTKAQEVEIDEEM EECCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]