Click here to switch to the map view.

The map label for this gene is dfnY

Identifier: 154686638

GI number: 154686638

Start: 2342987

End: 2343967

Strand: Reverse

Name: dfnY

Synonym: RBAM_022070

Alternate gene names: NA

Gene position: 2343967-2342987 (Counterclockwise)

Preceding gene: 154686639

Following gene: 154686637

Centisome position: 59.82

GC content: 47.6

Gene sequence:

>981_bases
ATGCTGATTGAAAATCAGGAATTAACGATGAGCCATGTCGGGTTAGGGAATTTGAATGAGTACGCGCTGCTGCTGTTATT
CGGCAACGCACACAGTCACCATTTAACGGACGGAACGGGATTCCGGCCTGATCAGATGGCCGATCACCAAGGGCTGATTT
TGTATCCGGCTTATTTTATGACACATCTCAAAGTTCCTTCAGATCAGCCTCTTGATCAGTACCGATTATGGGACGAGGTT
TCCGTCGGAGTCGATATCTCCCGGTTTGGAGAAACCATATTAGAATCTGATTATTTGTTCGGGCCGAAAGGAGCGGTCAG
CTCTGATAAAAGCGAGTGGGACCGGGGACGGTTTCCTTCTATGAAAGCCAATAGTTTAATTGTCGTCGACGTCACACAAA
CAGAAGGTTCGACGCGCAAAGTCTCAGCGCCTAAGGCTGAATGCATTGCGGAACTTTCTAAGCTAGCCAAGCCGCCTTAC
GCCCTGATGCGGTCAAAGAAAATCAGAACGGACGCCTTCGGTATGAAGCCGGGCAATCTCAAAACAGCAGACCCCGTTTC
ATATCGGGTTCCTGTTGATCAGGATGCTGCGCCCGGGCATGCCATGGTGTTTGCGAAATTCAGCAAGATAATGGATGCGG
CGGAATTTGAATGGATGACGCGCCGGTCGAAGCCGGGTTTTCCGCTTTCAATCGCGCGGCATTTATTTTTGCTTGAAAGA
GAGACGTATTATTACGGAAATTGTTTTGCAGATGAAGAGCTTGATATTTATATGACGGGACACATTGAAGAATGCGATCC
CGACTTTCACGGTGAGTCCCTCGGTATGATCTCAGTGGCGAAAATCAGCTATCAGATTGAAGTCTATATGAAAAGAAATC
ATACATTGCTGGCCATTTCCAAGGTGGACAAACTGCTGGCGGTGCCGACCTCTTCACAAGATCATATTCCGGATTATAAG
CGGGTCATCAGAAGTTTATAA

Upstream 100 bases:

>100_bases
CAGCTCATGGAAGAAACAGCCGGCCTTCTTGCGCAAAGGCTGGTATCGATTACAGGCTGAGTATGACCAGCCATTACATT
TTTTCTGCGGAGGACAGACC

Downstream 100 bases:

>100_bases
AATGAAGAATGGAGCTGAAAGCAAATGGAACAAACCAAGGAAATGAAGCAGATCATCGCTCAAATCATTCAGGATATTCA
AGAACAGCAGTCATATCGGG

Product: DfnY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLIENQELTMSHVGLGNLNEYALLLLFGNAHSHHLTDGTGFRPDQMADHQGLILYPAYFMTHLKVPSDQPLDQYRLWDEV
SVGVDISRFGETILESDYLFGPKGAVSSDKSEWDRGRFPSMKANSLIVVDVTQTEGSTRKVSAPKAECIAELSKLAKPPY
ALMRSKKIRTDAFGMKPGNLKTADPVSYRVPVDQDAAPGHAMVFAKFSKIMDAAEFEWMTRRSKPGFPLSIARHLFLLER
ETYYYGNCFADEELDIYMTGHIEECDPDFHGESLGMISVAKISYQIEVYMKRNHTLLAISKVDKLLAVPTSSQDHIPDYK
RVIRSL

Sequences:

>Translated_326_residues
MLIENQELTMSHVGLGNLNEYALLLLFGNAHSHHLTDGTGFRPDQMADHQGLILYPAYFMTHLKVPSDQPLDQYRLWDEV
SVGVDISRFGETILESDYLFGPKGAVSSDKSEWDRGRFPSMKANSLIVVDVTQTEGSTRKVSAPKAECIAELSKLAKPPY
ALMRSKKIRTDAFGMKPGNLKTADPVSYRVPVDQDAAPGHAMVFAKFSKIMDAAEFEWMTRRSKPGFPLSIARHLFLLER
ETYYYGNCFADEELDIYMTGHIEECDPDFHGESLGMISVAKISYQIEVYMKRNHTLLAISKVDKLLAVPTSSQDHIPDYK
RVIRSL
>Mature_326_residues
MLIENQELTMSHVGLGNLNEYALLLLFGNAHSHHLTDGTGFRPDQMADHQGLILYPAYFMTHLKVPSDQPLDQYRLWDEV
SVGVDISRFGETILESDYLFGPKGAVSSDKSEWDRGRFPSMKANSLIVVDVTQTEGSTRKVSAPKAECIAELSKLAKPPY
ALMRSKKIRTDAFGMKPGNLKTADPVSYRVPVDQDAAPGHAMVFAKFSKIMDAAEFEWMTRRSKPGFPLSIARHLFLLER
ETYYYGNCFADEELDIYMTGHIEECDPDFHGESLGMISVAKISYQIEVYMKRNHTLLAISKVDKLLAVPTSSQDHIPDYK
RVIRSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36744; Mature: 36744

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIENQELTMSHVGLGNLNEYALLLLFGNAHSHHLTDGTGFRPDQMADHQGLILYPAYFM
CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEEEHHHHH
THLKVPSDQPLDQYRLWDEVSVGVDISRFGETILESDYLFGPKGAVSSDKSEWDRGRFPS
HEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCC
MKANSLIVVDVTQTEGSTRKVSAPKAECIAELSKLAKPPYALMRSKKIRTDAFGMKPGNL
CCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCC
KTADPVSYRVPVDQDAAPGHAMVFAKFSKIMDAAEFEWMTRRSKPGFPLSIARHLFLLER
CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEC
ETYYYGNCFADEELDIYMTGHIEECDPDFHGESLGMISVAKISYQIEVYMKRNHTLLAIS
CEEEECCEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEE
KVDKLLAVPTSSQDHIPDYKRVIRSL
CCCHHEECCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MLIENQELTMSHVGLGNLNEYALLLLFGNAHSHHLTDGTGFRPDQMADHQGLILYPAYFM
CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEEEEHHHHH
THLKVPSDQPLDQYRLWDEVSVGVDISRFGETILESDYLFGPKGAVSSDKSEWDRGRFPS
HEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCCC
MKANSLIVVDVTQTEGSTRKVSAPKAECIAELSKLAKPPYALMRSKKIRTDAFGMKPGNL
CCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCC
KTADPVSYRVPVDQDAAPGHAMVFAKFSKIMDAAEFEWMTRRSKPGFPLSIARHLFLLER
CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEC
ETYYYGNCFADEELDIYMTGHIEECDPDFHGESLGMISVAKISYQIEVYMKRNHTLLAIS
CEEEECCEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEEE
KVDKLLAVPTSSQDHIPDYKRVIRSL
CCCHHEECCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA