Click here to switch to the map view.

The map label for this gene is spoVAB [H]

Identifier: 154686585

GI number: 154686585

Start: 2245333

End: 2245758

Strand: Reverse

Name: spoVAB [H]

Synonym: RBAM_021540

Alternate gene names: 154686585

Gene position: 2245758-2245333 (Counterclockwise)

Preceding gene: 154686586

Following gene: 154686584

Centisome position: 57.31

GC content: 48.36

Gene sequence:

>426_bases
ATGATCGTTAGCATTCTTTTCGTTATGTTTGTCGGGCTTGGCGGAGGGCTGACCGTGGGAGCGGGCTTTGTGGCTTTTTT
AACCGTTATGGGAATCATCCCCCGCCTTATGCAGCTGACAAAAACAATGCGCTTTGTACAGGCCTACGAAGGAGCTGTTA
TTTCAGGAGCTGTGTTCGGCGGCTGGGAAACCTTAAATATGAATCATTTTTTTTTATCTGAATGGCTGGCCGTTCCGGTC
GGACTTTTGGCCGGCATGTTTGTCGGCATGCTGGCCGCCGCGCTTACAGAAGTGCTGAATGTGCTTCCCATTCTTGCCAA
ACGGATCGGCTTCGGCAGCAAAATCATCATATTGCTGATGGCCATTGTGTTCGGCAAGATAGCCGGCTCTTTATTTCATT
GGCTGTATTTTATCCATCATTCATAA

Upstream 100 bases:

>100_bases
GAAGAGCCAAGCCCGCTGGAAGTCGAGATGTTTAATTATCAGCTTGATCTCGATCATTATGTCGCAATGCACGAAAATGA
AGAGACGATGAAAGATCTGC

Downstream 100 bases:

>100_bases
GGAGGAACCGACATGACAAACTTAAAAGAAAATTACAAAACAAAAGTGAAAGACTATCAGCCGAAACCGCCATATGTTTG
GAATTGCGTCAAAGCCTTTC

Product: SpoVAB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYEGAVISGAVFGGWETLNMNHFFLSEWLAVPV
GLLAGMFVGMLAAALTEVLNVLPILAKRIGFGSKIIILLMAIVFGKIAGSLFHWLYFIHHS

Sequences:

>Translated_141_residues
MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYEGAVISGAVFGGWETLNMNHFFLSEWLAVPV
GLLAGMFVGMLAAALTEVLNVLPILAKRIGFGSKIIILLMAIVFGKIAGSLFHWLYFIHHS
>Mature_141_residues
MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYEGAVISGAVFGGWETLNMNHFFLSEWLAVPV
GLLAGMFVGMLAAALTEVLNVLPILAKRIGFGSKIIILLMAIVFGKIAGSLFHWLYFIHHS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020144
- ProDom:   PD086170 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15235; Mature: 15235

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYEGAVISGAVFG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHC
GWETLNMNHFFLSEWLAVPVGLLAGMFVGMLAAALTEVLNVLPILAKRIGFGSKIIILLM
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIVFGKIAGSLFHWLYFIHHS
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVSILFVMFVGLGGGLTVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYEGAVISGAVFG
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHC
GWETLNMNHFFLSEWLAVPVGLLAGMFVGMLAAALTEVLNVLPILAKRIGFGSKIIILLM
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AIVFGKIAGSLFHWLYFIHHS
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]