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The map label for this gene is spoVAA [H]

Identifier: 154686586

GI number: 154686586

Start: 2245748

End: 2246368

Strand: Reverse

Name: spoVAA [H]

Synonym: RBAM_021550

Alternate gene names: 154686586

Gene position: 2246368-2245748 (Counterclockwise)

Preceding gene: 154686587

Following gene: 154686585

Centisome position: 57.33

GC content: 44.93

Gene sequence:

>621_bases
ATGGAAAGACGAATATTTCTCAGACTTCGCCACCGCGTGAAGGCTCATACCGGAGATATCATCACAATCGGCGACGCCGC
GCAGATTGCGGGACAGCAAAAGCTGAAAAAAAAACTGTCGGCACTGCCGCTGTATAAGGTCACGAAAAAAGACAAAAATA
TCGTCGTGCTGGACATTATAAAAGTGCTGAAAACCATTCATACCGCTTTTCCCGCGCTTGATGTACAGACCGTCGGCGGC
GCTGAAACGATAGTGGAAATCCATTACCAGAAAAAGCAGCTGTCAGCCGTTTTATTCGTCGGTGTCTGGCTCCTGCTTTT
TATCGGTTCATGTCTTGCCATTATGAATTTTCATGAAGATGTCAGTATGAGAGAAGTTCATATCGCCTTATATGAAATCA
TAACGGGCGAACGGAATGAATACCCGTATCTGCTTCAGATTCCGTACAGCATCGGCCTCGGTCTCGGTATGATCGTCTTT
TTTAATCACATCTTCAAAAAACGCCTGAATGAAGAGCCAAGCCCGCTGGAAGTCGAGATGTTTAATTATCAGCTTGATCT
CGATCATTATGTCGCAATGCACGAAAATGAAGAGACGATGAAAGATCTGCATGATCGTTAG

Upstream 100 bases:

>100_bases
TGTGCATCGGTGGTAATTTATGGTCTTTTGCCGCTGATGAATGAGAACAAAAGTGAACCGCATACTACATATATAACCAC
CCGAAAGATGGTGATGCAAG

Downstream 100 bases:

>100_bases
CATTCTTTTCGTTATGTTTGTCGGGCTTGGCGGAGGGCTGACCGTGGGAGCGGGCTTTGTGGCTTTTTTAACCGTTATGG
GAATCATCCCCCGCCTTATG

Product: SpoVAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTKKDKNIVVLDIIKVLKTIHTAFPALDVQTVGG
AETIVEIHYQKKQLSAVLFVGVWLLLFIGSCLAIMNFHEDVSMREVHIALYEIITGERNEYPYLLQIPYSIGLGLGMIVF
FNHIFKKRLNEEPSPLEVEMFNYQLDLDHYVAMHENEETMKDLHDR

Sequences:

>Translated_206_residues
MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTKKDKNIVVLDIIKVLKTIHTAFPALDVQTVGG
AETIVEIHYQKKQLSAVLFVGVWLLLFIGSCLAIMNFHEDVSMREVHIALYEIITGERNEYPYLLQIPYSIGLGLGMIVF
FNHIFKKRLNEEPSPLEVEMFNYQLDLDHYVAMHENEETMKDLHDR
>Mature_206_residues
MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTKKDKNIVVLDIIKVLKTIHTAFPALDVQTVGG
AETIVEIHYQKKQLSAVLFVGVWLLLFIGSCLAIMNFHEDVSMREVHIALYEIITGERNEYPYLLQIPYSIGLGLGMIVF
FNHIFKKRLNEEPSPLEVEMFNYQLDLDHYVAMHENEETMKDLHDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021997 [H]

Pfam domain/function: PF12164 SporV_AA [H]

EC number: NA

Molecular weight: Translated: 23769; Mature: 23769

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTKKDKNIVVLDII
CCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEECCCCCCEEHHHHH
KVLKTIHTAFPALDVQTVGGAETIVEIHYQKKQLSAVLFVGVWLLLFIGSCLAIMNFHED
HHHHHHHHHCCCCCEEECCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSMREVHIALYEIITGERNEYPYLLQIPYSIGLGLGMIVFFNHIFKKRLNEEPSPLEVEM
CHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
FNYQLDLDHYVAMHENEETMKDLHDR
EEEEECHHHHEEECCCHHHHHHHCCC
>Mature Secondary Structure
MERRIFLRLRHRVKAHTGDIITIGDAAQIAGQQKLKKKLSALPLYKVTKKDKNIVVLDII
CCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCCCEECCCCCCEEHHHHH
KVLKTIHTAFPALDVQTVGGAETIVEIHYQKKQLSAVLFVGVWLLLFIGSCLAIMNFHED
HHHHHHHHHCCCCCEEECCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSMREVHIALYEIITGERNEYPYLLQIPYSIGLGLGMIVFFNHIFKKRLNEEPSPLEVEM
CHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
FNYQLDLDHYVAMHENEETMKDLHDR
EEEEECHHHHEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]