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The map label for this gene is spmB [H]

Identifier: 154686562

GI number: 154686562

Start: 2226837

End: 2227373

Strand: Reverse

Name: spmB [H]

Synonym: RBAM_021310

Alternate gene names: 154686562

Gene position: 2227373-2226837 (Counterclockwise)

Preceding gene: 154686563

Following gene: 154686561

Centisome position: 56.84

GC content: 51.21

Gene sequence:

>537_bases
ATGGAAATGGTGAATTGGCTGTCTTTAGCCATGATTCCGATTATTATCGCCGGTATATTGATATACGGCACGATCAAAAA
AGTGCCGACGTATGAATCATTCGTTGAAGGCGGAAAAGAAGGAATTGAGATTGCGTTTTCCATCATTCCGTATTTGGTCG
GGATGCTGGTGGCGATTACCGTATTCCGGGCCTCGGGCGCGCTGGATTTTGTCATGGGGCTGTGCAAGCCTTTCTTTACA
GCGCTCGGCATTCCCGCAGAAGTCGTGCCGCTTGCTCTGATCCGCCCGATTTCGGGGACGGCGGCGCTCGGCATGACGAC
AGATCTGATCGCCGTGTACGGGCCTGATTCATTTATCGGCAGGCTGGCTTCGGTCATGCAGGGATCGACTGACACGACGC
TGTATGTCCTGACGGTGTATTTCGGGGCGGTCGGCATCAAAAAAATGGGGGATGCTTTAAAGGTTGGTCTTCTTGCTGAT
TTGATCGGGGTGGTTGCATCAATCATCATAGTTACGTTATTATTTGGAAGCGCCTGA

Upstream 100 bases:

>100_bases
GTCGGGCCGACCATCTTAGCGACTTTAATTTCGGGAATCGGCGCGATTTTCATTGACCGCTACTTCTGGTACCGCCGCAA
AAGAAAAGGGAGGTAAGCGA

Downstream 100 bases:

>100_bases
AATCAGGCGCTTTTTATATATCAAAATAACTCTCCTTGAAAAAGCTTGTTTGTTCAAGGGGAAAAAAGTAAGATTATACT
TGAGGTGAACGACATGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEMVNWLSLAMIPIIIAGILIYGTIKKVPTYESFVEGGKEGIEIAFSIIPYLVGMLVAITVFRASGALDFVMGLCKPFFT
ALGIPAEVVPLALIRPISGTAALGMTTDLIAVYGPDSFIGRLASVMQGSTDTTLYVLTVYFGAVGIKKMGDALKVGLLAD
LIGVVASIIIVTLLFGSA

Sequences:

>Translated_178_residues
MEMVNWLSLAMIPIIIAGILIYGTIKKVPTYESFVEGGKEGIEIAFSIIPYLVGMLVAITVFRASGALDFVMGLCKPFFT
ALGIPAEVVPLALIRPISGTAALGMTTDLIAVYGPDSFIGRLASVMQGSTDTTLYVLTVYFGAVGIKKMGDALKVGLLAD
LIGVVASIIIVTLLFGSA
>Mature_178_residues
MEMVNWLSLAMIPIIIAGILIYGTIKKVPTYESFVEGGKEGIEIAFSIIPYLVGMLVAITVFRASGALDFVMGLCKPFFT
ALGIPAEVVPLALIRPISGTAALGMTTDLIAVYGPDSFIGRLASVMQGSTDTTLYVLTVYFGAVGIKKMGDALKVGLLAD
LIGVVASIIIVTLLFGSA

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 18666; Mature: 18666

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMVNWLSLAMIPIIIAGILIYGTIKKVPTYESFVEGGKEGIEIAFSIIPYLVGMLVAIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VFRASGALDFVMGLCKPFFTALGIPAEVVPLALIRPISGTAALGMTTDLIAVYGPDSFIG
HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHEEECCHHHHH
RLASVMQGSTDTTLYVLTVYFGAVGIKKMGDALKVGLLADLIGVVASIIIVTLLFGSA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMVNWLSLAMIPIIIAGILIYGTIKKVPTYESFVEGGKEGIEIAFSIIPYLVGMLVAIT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VFRASGALDFVMGLCKPFFTALGIPAEVVPLALIRPISGTAALGMTTDLIAVYGPDSFIG
HHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHCHHHHHHEEECCHHHHH
RLASVMQGSTDTTLYVLTVYFGAVGIKKMGDALKVGLLADLIGVVASIIIVTLLFGSA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]