| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is ypbG [H]
Identifier: 154686544
GI number: 154686544
Start: 2209547
End: 2210335
Strand: Reverse
Name: ypbG [H]
Synonym: RBAM_021130
Alternate gene names: 154686544
Gene position: 2210335-2209547 (Counterclockwise)
Preceding gene: 154686545
Following gene: 154686543
Centisome position: 56.41
GC content: 50.82
Gene sequence:
>789_bases ATGAAGCTTACAGCGGGAATTCTCGGCTCATTGGCGGGAGCGGCTGCGGTTATGGCGGCCGTTATGTACAAAACGGCAAA CGGCAGCCATCTGAAAACACATACATTTACGCTTGATAAAATGAAGGGGATGAAGCCGCTCACCATCTTTTTTATATCTG ACGTGCACCGCCGTTTAATTGATGAAAAGCTTCTCCGCGAAGCGGCAGGTTATAAGCCGGATGCCGTTTTGCTCGGCGGT GATTTGGCGGAGGGCGGAGTTCCTTACGCCAGAATTGAAGAAAACATTAAACGTCTTACGGCTCTTGCGCCTGTCATGTA TGTGTGGGGAAATAATGATTACGAGGTCAGCCAGCAAAAACTGCTCTCTCTTTTACGGGCATATAAAGTGATCCCGCTGA GAAATGAATCGGTTCAGTTTGCTTATAAAGGGGAAACCGTTACGATCTGCGGGGTGGATGATATCAGGATGATGATGGAT GATTACGAATCTGCAATCAGATATACGGATGCTGACAAAGTAAACCTCCTGCTTTGCCATAACCCGGACATCCATGAGCA GATGAGGGAGTCAGACGGGATTGACGCTGTGTTCAGCGGCCATACGCATGGCGGCCAAATCCGTTTCGGACGGTTCGGGC CGTACGAATTGGGCGGGACGGGAACGGTAAAAAAAGCGCATTACCTGATCAGCAACGGCTACGGGACGACAAAAGTTCCG CTGAGGCTCGGGGCGAAACCGGAGACGCATATGATTACGCTGTGCGGACCGGATGAGCCGTCTTCCTGA
Upstream 100 bases:
>100_bases TTGAAAGCAAATAAAATGAGGCGTTTTCCGGAAAGGATAGAAACGTCTTTTTTTGTTTGTCCGTCTAATATAAGACAATG ACAGAATGGAGAGTGCGTTT
Downstream 100 bases:
>100_bases AACAAACCCGGCCGCGGTGATAAAAAACGGCATTCTGCTTGTCTTCCCGCTGTACACGGTGTAAACTGATAACAAATTAA GAACCTATGACTCATTTATT
Product: YpbG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIFFISDVHRRLIDEKLLREAAGYKPDAVLLGG DLAEGGVPYARIEENIKRLTALAPVMYVWGNNDYEVSQQKLLSLLRAYKVIPLRNESVQFAYKGETVTICGVDDIRMMMD DYESAIRYTDADKVNLLLCHNPDIHEQMRESDGIDAVFSGHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVP LRLGAKPETHMITLCGPDEPSS
Sequences:
>Translated_262_residues MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIFFISDVHRRLIDEKLLREAAGYKPDAVLLGG DLAEGGVPYARIEENIKRLTALAPVMYVWGNNDYEVSQQKLLSLLRAYKVIPLRNESVQFAYKGETVTICGVDDIRMMMD DYESAIRYTDADKVNLLLCHNPDIHEQMRESDGIDAVFSGHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVP LRLGAKPETHMITLCGPDEPSS >Mature_262_residues MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIFFISDVHRRLIDEKLLREAAGYKPDAVLLGG DLAEGGVPYARIEENIKRLTALAPVMYVWGNNDYEVSQQKLLSLLRAYKVIPLRNESVQFAYKGETVTICGVDDIRMMMD DYESAIRYTDADKVNLLLCHNPDIHEQMRESDGIDAVFSGHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVP LRLGAKPETHMITLCGPDEPSS
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081695, Length=227, Percent_Identity=28.6343612334802, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 28810; Mature: 28810
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIFFISDVHRRLI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCEEEEEHHHHHHHHH DEKLLREAAGYKPDAVLLGGDLAEGGVPYARIEENIKRLTALAPVMYVWGNNDYEVSQQK HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHH LLSLLRAYKVIPLRNESVQFAYKGETVTICGVDDIRMMMDDYESAIRYTDADKVNLLLCH HHHHHHHHHEEEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHEECCCCCEEEEEEC NPDIHEQMRESDGIDAVFSGHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVP CCCHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCHHHEEEEEECCCCCEEEE LRLGAKPETHMITLCGPDEPSS EEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKLTAGILGSLAGAAAVMAAVMYKTANGSHLKTHTFTLDKMKGMKPLTIFFISDVHRRLI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCEEEEEHHHHHHHHH DEKLLREAAGYKPDAVLLGGDLAEGGVPYARIEENIKRLTALAPVMYVWGNNDYEVSQQK HHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCHHHHH LLSLLRAYKVIPLRNESVQFAYKGETVTICGVDDIRMMMDDYESAIRYTDADKVNLLLCH HHHHHHHHHEEEECCCCEEEEECCCEEEEECCHHHHHHHHHHHHHHEECCCCCEEEEEEC NPDIHEQMRESDGIDAVFSGHTHGGQIRFGRFGPYELGGTGTVKKAHYLISNGYGTTKVP CCCHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCHHHEEEEEECCCCCEEEE LRLGAKPETHMITLCGPDEPSS EEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]