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The map label for this gene is yphA [H]

Identifier: 154686533

GI number: 154686533

Start: 2198155

End: 2198757

Strand: Reverse

Name: yphA [H]

Synonym: RBAM_021010

Alternate gene names: 154686533

Gene position: 2198757-2198155 (Counterclockwise)

Preceding gene: 154686534

Following gene: 154686532

Centisome position: 56.11

GC content: 45.27

Gene sequence:

>603_bases
ATGGAACCGTTTTATTATTACTGGTCAATGTGGTTTTTATGGATACTTGCGACTTTTATTTTTGCCAAAACGAAAAGCCG
TTTTTACGTATCAGTCTTTATTTTGACTAATATGATGGCAAGCATACATCAGATTACGGCTTATTTTACGCTGAATGCGG
CATATGTCATGTTTTTTGCTGCGGCATTTGTTTATGCGGGAAGCCTCGGCATGCATAAACGGCTCCGTAATATTGTGATT
CATCTGACGGCGGCTGCGGCGTACGGCTTTATTTTTCTTTTTGCATTATATGATCCTGTTTGGTTTATCATAAAACCTGA
ATGGGCGGCGGTTATACTGCTTACCGTTATTACGCTTTCCGTTGAGGGGCGGTTCCCTGAGAGGCTTTGTCTTTTTGTTC
TCGGCATGTGCCAGGGGGAGCTATTGTATGCTGCGGTCATCCGCAATATTGCGGGTGCTGCAGCCGTCGGGGATTATAAA
TGGCTTTCAGGCTGTTCGGCGGGAGTGATTCTTCTCGTCGGGCTGACTACATATGAACAGCTTGCGGCGCGCATCAGCCA
AAAAAGCAAAAAGCAGGGCAAAGGAGCGACAAAAATGTCTTGA

Upstream 100 bases:

>100_bases
TTTCTCCTGTCTGTCTTTTCCCATCCTTATCCGCTCCTTTCAGGCATAATTGGTTTAAAAAATGCGTTCCCGCTCCATAC
TGATCAGAGGAGGAGCGATT

Downstream 100 bases:

>100_bases
AAACAGACGGAGACTGTTACATGAATGCGAAACATTTTGAAGAATACATTGTGATCTCAGTGAAAACTGATATAATAAAT
GAGTTAAGCCCTTCTGTTTG

Product: YphA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFTLNAAYVMFFAAAFVYAGSLGMHKRLRNIVI
HLTAAAAYGFIFLFALYDPVWFIIKPEWAAVILLTVITLSVEGRFPERLCLFVLGMCQGELLYAAVIRNIAGAAAVGDYK
WLSGCSAGVILLVGLTTYEQLAARISQKSKKQGKGATKMS

Sequences:

>Translated_200_residues
MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFTLNAAYVMFFAAAFVYAGSLGMHKRLRNIVI
HLTAAAAYGFIFLFALYDPVWFIIKPEWAAVILLTVITLSVEGRFPERLCLFVLGMCQGELLYAAVIRNIAGAAAVGDYK
WLSGCSAGVILLVGLTTYEQLAARISQKSKKQGKGATKMS
>Mature_200_residues
MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFTLNAAYVMFFAAAFVYAGSLGMHKRLRNIVI
HLTAAAAYGFIFLFALYDPVWFIIKPEWAAVILLTVITLSVEGRFPERLCLFVLGMCQGELLYAAVIRNIAGAAAVGDYK
WLSGCSAGVILLVGLTTYEQLAARISQKSKKQGKGATKMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014617 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22503; Mature: 22503

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFTLNAAYVMFFA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFVYAGSLGMHKRLRNIVIHLTAAAAYGFIFLFALYDPVWFIIKPEWAAVILLTVITLS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH
VEGRFPERLCLFVLGMCQGELLYAAVIRNIAGAAAVGDYKWLSGCSAGVILLVGLTTYEQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHHH
LAARISQKSKKQGKGATKMS
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEPFYYYWSMWFLWILATFIFAKTKSRFYVSVFILTNMMASIHQITAYFTLNAAYVMFFA
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFVYAGSLGMHKRLRNIVIHLTAAAAYGFIFLFALYDPVWFIIKPEWAAVILLTVITLS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHH
VEGRFPERLCLFVLGMCQGELLYAAVIRNIAGAAAVGDYKWLSGCSAGVILLVGLTTYEQ
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEHHHHHHH
LAARISQKSKKQGKGATKMS
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]