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The map label for this gene is qcrB [H]

Identifier: 154686503

GI number: 154686503

Start: 2170433

End: 2171107

Strand: Reverse

Name: qcrB [H]

Synonym: RBAM_020710

Alternate gene names: 154686503

Gene position: 2171107-2170433 (Counterclockwise)

Preceding gene: 154686504

Following gene: 154686502

Centisome position: 55.41

GC content: 47.41

Gene sequence:

>675_bases
ATGCTGAACAAAATTTATGACTGGGTGGATGAACGTCTCGATATTACGCCGATGTGGCGGGATATCGCCGACCATGAAGT
GCCGGAACATGTAAATCCCGCTCACCATTTCTCGGCTTTTGTCTATTGTTTCGGCGGTTTGACGTTTTTTGTAACCGTTA
TCCAAGTGTTGTCCGGGATGTTTTTAACGATGTATTATGTGCCGGATATAAAAAACGCGTGGGAATCTGTGTATTATTTG
CAGAATGAAGTCGCTTTCGGGCAGATTGTAAGGGGGATGCACCATTGGGGCGCAAGTTTAGTCATTGTGATGATGTTTTT
ACATACGCTGCGGGTTTTCTTTCAGGGAGCTTATAAAAAGCCTCGGGAATTGAACTGGATCGTCGGTGTTCTGATCTTTT
TTGTGATGCTCGGTCTCGGTTTTACAGGGTATCTGCTTCCATGGGATATGAAGGCGCTGTTTGCGACAAAGGTAGGTCTT
CAGATTGCGGAGGCGACGCCATTGATCGGAGCGCAGGTGAAAACTCTTCTTGCCGGCCACCACGATATTGTCGGCGCACA
AACGCTGACGAGATTTTTTGCGATTCACGTATTTTTTCTCCCTGCCGCTTTGTTTGCGCTCATGGGCGCCCACTTTGTCA
TGATCCGCAAGCAGGGAATTTCAGGACCGCTTTAA

Upstream 100 bases:

>100_bases
CCGGGCACGCCGCCGCTCGCGCCTCTTGACCGTTATGAGCAAAAAGTAAAGGACGGCTTTTTGTATCTTGGAAAAGCAAA
GCCTAGGGGGGAAGGGTGAC

Downstream 100 bases:

>100_bases
TACAAATCTGATATAAAAGGGAGGGGATGACATGCACCGGGGGAAAGGAATGAAGTTTGTAGGAGATTCAAGGATACCGG
CTGAAAAAAAACCGAATATA

Product: cytochrome b6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGMFLTMYYVPDIKNAWESVYYL
QNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKKPRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGL
QIAEATPLIGAQVKTLLAGHHDIVGAQTLTRFFAIHVFFLPAALFALMGAHFVMIRKQGISGPL

Sequences:

>Translated_224_residues
MLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGMFLTMYYVPDIKNAWESVYYL
QNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKKPRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGL
QIAEATPLIGAQVKTLLAGHHDIVGAQTLTRFFAIHVFFLPAALFALMGAHFVMIRKQGISGPL
>Mature_224_residues
MLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGMFLTMYYVPDIKNAWESVYYL
QNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKKPRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGL
QIAEATPLIGAQVKTLLAGHHDIVGAQTLTRFFAIHVFFLPAALFALMGAHFVMIRKQGISGPL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=183, Percent_Identity=31.1475409836066, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6226529, Length=203, Percent_Identity=30.0492610837438, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6226532, Length=203, Percent_Identity=30.0492610837438, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6226531, Length=158, Percent_Identity=29.746835443038, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6226530, Length=123, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.-

Molecular weight: Translated: 25485; Mature: 25485

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGM
CCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIGAQVKTLLAGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
HDIVGAQTLTRFFAIHVFFLPAALFALMGAHFVMIRKQGISGPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNKIYDWVDERLDITPMWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFVTVIQVLSGM
CCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIKNAWESVYYLQNEVAFGQIVRGMHHWGASLVIVMMFLHTLRVFFQGAYKK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRELNWIVGVLIFFVMLGLGFTGYLLPWDMKALFATKVGLQIAEATPLIGAQVKTLLAGH
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
HDIVGAQTLTRFFAIHVFFLPAALFALMGAHFVMIRKQGISGPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]