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The map label for this gene is qcrC [H]

Identifier: 154686502

GI number: 154686502

Start: 2169634

End: 2170401

Strand: Reverse

Name: qcrC [H]

Synonym: RBAM_020700

Alternate gene names: 154686502

Gene position: 2170401-2169634 (Counterclockwise)

Preceding gene: 154686503

Following gene: 154686501

Centisome position: 55.39

GC content: 49.74

Gene sequence:

>768_bases
ATGCACCGGGGGAAAGGAATGAAGTTTGTAGGAGATTCAAGGATACCGGCTGAAAAAAAACCGAATATACCGAAAGACTA
TTCAGAGTATCCTGGAAAGACAGAGGCGTTTTGGCCGAACTTCCTGCTGAAAGAATGGATGGTCGGGGCCGTTTTCCTCG
TCGGATTTCTCGTTTTAACGATTGTGCACGAGCCGCCTTTGGAACGGGTGGCGGACCCGACGGATACAGGGTATATTCCG
CTGCCGGATTGGTATTTTCTATTTTTATACCAGCTATTAAAATATGAATATGCCGCAGGGAGCTACACCGTTATCGGCGC
GATGATTATACCGGGTCTTGCCTTCGGGTCGCTGCTTTTGGCTCCGTTTCTCGACAGGGGGTCTGAAAGAAGGCCGTGGA
AGCGTCCGGTTGCGGTCGGCATGATGCTTTTGGCGCTTTGCGCTACGGTCTTTTTAACGTGGCAGTCAGTCGCGACGCAT
GACTGGGCGAAGGCGGAGGAGCAAGGGAAAATCAAAAAAGAAGCCGCCATTGATACTGAATCAGACGGTTATAAGGTATT
TAAAGAACAAGGCTGTATTTCCTGTCACGGGGATAATCTTCAAGGCGGAAGCGCCGGTCCGTCCCTGGTCGATAACGGGC
TGAGCCCGGAAGAAATTAAAAAAATCGCCGTCAAAGGGAAAGGGCAGATGCCAGCCGGTATTTTTAAAGGGAATGACAAA
CAGCTTGATCAGCTGGCGAAGTTCATTTCTGAAACGACAGCGAAATAA

Upstream 100 bases:

>100_bases
GCTTTGTTTGCGCTCATGGGCGCCCACTTTGTCATGATCCGCAAGCAGGGAATTTCAGGACCGCTTTAATACAAATCTGA
TATAAAAGGGAGGGGATGAC

Downstream 100 bases:

>100_bases
CGTATTGTGAAGTAGACAATAGCAGGATATACTTTTATGAAAAGAGCTGACCGGATGTCAGCTTTTTTTGCATGATACAT
ACTTTTTACGGACTGAGAGT

Product: QcrC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERVADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSYTVIGAMIIPGLAFGSLLLAPFLDRGSERRPWKRPVAVGMMLLALCATVFLTWQSVATH
DWAKAEEQGKIKKEAAIDTESDGYKVFKEQGCISCHGDNLQGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDK
QLDQLAKFISETTAK

Sequences:

>Translated_255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERVADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSYTVIGAMIIPGLAFGSLLLAPFLDRGSERRPWKRPVAVGMMLLALCATVFLTWQSVATH
DWAKAEEQGKIKKEAAIDTESDGYKVFKEQGCISCHGDNLQGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDK
QLDQLAKFISETTAK
>Mature_255_residues
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLVGFLVLTIVHEPPLERVADPTDTGYIP
LPDWYFLFLYQLLKYEYAAGSYTVIGAMIIPGLAFGSLLLAPFLDRGSERRPWKRPVAVGMMLLALCATVFLTWQSVATH
DWAKAEEQGKIKKEAAIDTESDGYKVFKEQGCISCHGDNLQGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDK
QLDQLAKFISETTAK

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR012049 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00034 Cytochrom_C [H]

EC number: 1.10.2.-

Molecular weight: Translated: 28191; Mature: 28191

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: PS51007 CYTC ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLVGFLVLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVHEPPLERVADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSYTVIGAMIIPGLAFGSLLL
HHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGSERRPWKRPVAVGMMLLALCATVFLTWQSVATHDWAKAEEQGKIKKEAAIDTE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SDGYKVFKEQGCISCHGDNLQGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDK
CCCHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCHH
QLDQLAKFISETTAK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGAVFLVGFLVLT
CCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVHEPPLERVADPTDTGYIPLPDWYFLFLYQLLKYEYAAGSYTVIGAMIIPGLAFGSLLL
HHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
APFLDRGSERRPWKRPVAVGMMLLALCATVFLTWQSVATHDWAKAEEQGKIKKEAAIDTE
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
SDGYKVFKEQGCISCHGDNLQGGSAGPSLVDNGLSPEEIKKIAVKGKGQMPAGIFKGNDK
CCCHHHHHHCCCEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCEECCCHH
QLDQLAKFISETTAK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]