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The map label for this gene is ypmB [H]

Identifier: 154686485

GI number: 154686485

Start: 2154214

End: 2154699

Strand: Reverse

Name: ypmB [H]

Synonym: RBAM_020530

Alternate gene names: 154686485

Gene position: 2154699-2154214 (Counterclockwise)

Preceding gene: 154686486

Following gene: 154686484

Centisome position: 54.99

GC content: 41.77

Gene sequence:

>486_bases
ATGAGAAAAAAAGCATTAATATTTACAGCCGTATTTGGTATTATTTTTTTAGCAGTTCTTTTATTTTCGGCCAGCATTTT
TAAATCTGCAATGGCCCAAAAAGAAGAAGGCCACGAAACAGCTGCCGCAGCCGCTAAAGAAAAAACGGATCTGACAGATG
CTGAGAAAGTGGAGACCTTTGTCGGCAAACAGAAATATTATGTTGTTACCGGAACGGATAAACATGGAAAATATATGTAT
GTATGGGTTCCTGCCGACAAAAAAGCAAAAATTCTCTCAAAAAAAGCCAGTGACGGCATTTCAAGCGGCAAGGCTGCCAA
GATCGTTCGGGACGAAGGGCTTGTTTCCAAGCTGAATGGTGTTCACCCGGCGAGAGAAAACAATGTTCCGTTATGGGAAG
TGACCTATATCAACAAAAGCGGGCAGTATAGCTTTAGCTATGTGGACTTTACAAGCGGCAAGATTCTCAAAAACATCACA
CCGTGA

Upstream 100 bases:

>100_bases
CCGGACTTTGAAACGGGACAATCTGATGTTCGGCCTTGCGCTCGACGAAGAAAATCAAAATGAAGCGGTCTTCACCATTT
ATCGCACATAGGTGAAAAAG

Downstream 100 bases:

>100_bases
GACGTATTAGGGGGAGTTCAAGTTGAAATTGGCAAAAAGAGTATCCGCATTAACACCGTCTGCAACACTTGCAATTACTG
CAAAAGCGAAAGAGCTGAAA

Product: YpmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRKKALIFTAVFGIIFLAVLLFSASIFKSAMAQKEEGHETAAAAAKEKTDLTDAEKVETFVGKQKYYVVTGTDKHGKYMY
VWVPADKKAKILSKKASDGISSGKAAKIVRDEGLVSKLNGVHPARENNVPLWEVTYINKSGQYSFSYVDFTSGKILKNIT
P

Sequences:

>Translated_161_residues
MRKKALIFTAVFGIIFLAVLLFSASIFKSAMAQKEEGHETAAAAAKEKTDLTDAEKVETFVGKQKYYVVTGTDKHGKYMY
VWVPADKKAKILSKKASDGISSGKAAKIVRDEGLVSKLNGVHPARENNVPLWEVTYINKSGQYSFSYVDFTSGKILKNIT
P
>Mature_161_residues
MRKKALIFTAVFGIIFLAVLLFSASIFKSAMAQKEEGHETAAAAAKEKTDLTDAEKVETFVGKQKYYVVTGTDKHGKYMY
VWVPADKKAKILSKKASDGISSGKAAKIVRDEGLVSKLNGVHPARENNVPLWEVTYINKSGQYSFSYVDFTSGKILKNIT
P

Specific function: Unknown

COG id: COG5353

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 17729; Mature: 17729

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKALIFTAVFGIIFLAVLLFSASIFKSAMAQKEEGHETAAAAAKEKTDLTDAEKVETF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
VGKQKYYVVTGTDKHGKYMYVWVPADKKAKILSKKASDGISSGKAAKIVRDEGLVSKLNG
HCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHCC
VHPARENNVPLWEVTYINKSGQYSFSYVDFTSGKILKNITP
CCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEECCCCC
>Mature Secondary Structure
MRKKALIFTAVFGIIFLAVLLFSASIFKSAMAQKEEGHETAAAAAKEKTDLTDAEKVETF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH
VGKQKYYVVTGTDKHGKYMYVWVPADKKAKILSKKASDGISSGKAAKIVRDEGLVSKLNG
HCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHCC
VHPARENNVPLWEVTYINKSGQYSFSYVDFTSGKILKNITP
CCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]