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The map label for this gene is ypoC [H]

Identifier: 154686480

GI number: 154686480

Start: 2149624

End: 2150115

Strand: Reverse

Name: ypoC [H]

Synonym: RBAM_020480

Alternate gene names: 154686480

Gene position: 2150115-2149624 (Counterclockwise)

Preceding gene: 154686481

Following gene: 154686477

Centisome position: 54.87

GC content: 47.36

Gene sequence:

>492_bases
GTGACGGCGATTGACATTCTGGCAGGCTATGAAACATACCTGCGCAGCCTTACGGACTTGGAAAGCCTCGAGATCAAAAC
GGCGCTGCGCCGCCATCCGCTGTATATGGATTTCAGCGGTCAGCCAACCGTGCAGCCATGGAGGGAAAGGGGCGAATATG
TCCCGTTTCTGTTTCAGATTTGGAACGAAACGAAAGAAACGCTGCTTCCCGTTTTTCAAACAAGAAAATCGAGATGTGAT
CAAAATGACATGCTGAAGGGAATTGCCTGTCTGATTGCCGCTTTTCACTGGACGGCAGGGGAGCGGGTTACATCACTCGA
CTGGACTGTGCTTGAAACAAAGCATTTTCCCGCCGAACCGATCAATTGGGCGGAGCGAATGGCGTTTATTTTAACGAAAC
CGACTCAATTTCACTCGTTTATTCAGCTGGATGAATTGATGACGGAGATGAAGAAACAATATCATAAATATGAAGCCATG
AACAAATGTTAA

Upstream 100 bases:

>100_bases
GGTATCATTGTAAAGCGCAATCTCCCCGCTGTGCGGAATGTCCTTTGCTTCCGCTGTGCAGAGAAGGGCAGAAGCGTGAC
AAAAAAGGGCTGGTGAAACG

Downstream 100 bases:

>100_bases
GAACCTCCTTTTCTCATAAGGAGGTTTTTTTGTATGAAAAAAATCCTTCACCTGTTTGAGGTGAAGGATTTCGTCCGCTA
ATGAGCGGGATTTGACTGGA

Product: YpoC

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MTAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQPWRERGEYVPFLFQIWNETKETLLPVFQTRKSRCD
QNDMLKGIACLIAAFHWTAGERVTSLDWTVLETKHFPAEPINWAERMAFILTKPTQFHSFIQLDELMTEMKKQYHKYEAM
NKC

Sequences:

>Translated_163_residues
MTAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQPWRERGEYVPFLFQIWNETKETLLPVFQTRKSRCD
QNDMLKGIACLIAAFHWTAGERVTSLDWTVLETKHFPAEPINWAERMAFILTKPTQFHSFIQLDELMTEMKKQYHKYEAM
NKC
>Mature_162_residues
TAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQPWRERGEYVPFLFQIWNETKETLLPVFQTRKSRCDQ
NDMLKGIACLIAAFHWTAGERVTSLDWTVLETKHFPAEPINWAERMAFILTKPTQFHSFIQLDELMTEMKKQYHKYEAMN
KC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19269; Mature: 19138

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQPWRERGEYVPFLFQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCCHHHHHH
WNETKETLLPVFQTRKSRCDQNDMLKGIACLIAAFHWTAGERVTSLDWTVLETKHFPAEP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCC
INWAERMAFILTKPTQFHSFIQLDELMTEMKKQYHKYEAMNKC
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAIDILAGYETYLRSLTDLESLEIKTALRRHPLYMDFSGQPTVQPWRERGEYVPFLFQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHCCCCCHHHHHH
WNETKETLLPVFQTRKSRCDQNDMLKGIACLIAAFHWTAGERVTSLDWTVLETKHFPAEP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCCC
INWAERMAFILTKPTQFHSFIQLDELMTEMKKQYHKYEAMNKC
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 7814321; 9384377 [H]