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The map label for this gene is ypmS [H]

Identifier: 154686420

GI number: 154686420

Start: 2096739

End: 2097302

Strand: Reverse

Name: ypmS [H]

Synonym: RBAM_019880

Alternate gene names: 154686420

Gene position: 2097302-2096739 (Counterclockwise)

Preceding gene: 154686421

Following gene: 154686418

Centisome position: 53.52

GC content: 42.55

Gene sequence:

>564_bases
ATGAAAAAGTGGAAATCGCTGTTTTTTGTTCTTCTCGCACTCAATGTGATTGCCGCCGCGGTAATTGTGACATTATTGGT
TATGCCGGGAGAGCAGGCGAAAATACAAGATCAGACAAAAAGTGAGTACGGCTTTCATATCACGAGCTCGAAAGAATCTC
TTGCCAGGTTTGTGAATGCGTACTTAAAAGAGAAGGCATCGAATCAGCTTGACTACAAAGTGGACATCAATAACGATGTG
CACGTGGCAGGTAAAATCAAAGCATTCTCAACCTCCATTAACGCGGTCGTCACATTTGAACCGTCCGTACAGGAGAACGG
AGATGTGATGTTGAAAGTGACGAAGTTTTCATTAGGCGAATTAAGCCTGCCGATCAGCTTTGTGCTGAATTATATGGACA
GCTTTTATGAACTCCCGTCATTTGTGCACGTTCATTCCGGGGATAAAAGCATCGAGATCCGTCTGTCGGAAATGCCTTTA
GACAACGGCATGTATGTAAAAGCGGATAAAATCAATCTCGACACGGATGAAATTGAATTTTCCTATTATCATCCGAAACA
ATAA

Upstream 100 bases:

>100_bases
TGATGATTTTCATCCGAACGCAAAAGGGTATGCACTCATCGCCGATCGATTGTACGGCATCATTGAAAAACAAGGGTTAC
CAGCAGAATAGGGTGAAATG

Downstream 100 bases:

>100_bases
GTTTTCATAAAAAAAACACAGATCCTTTCAGGGATTTGTGTTTTTTCGTGTCAGCGTTTTTTATCCAGCTTGCTGAACAG
TTTGATTAACGTTGCGAGCT

Product: YpmS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSSKESLARFVNAYLKEKASNQLDYKVDINNDV
HVAGKIKAFSTSINAVVTFEPSVQENGDVMLKVTKFSLGELSLPISFVLNYMDSFYELPSFVHVHSGDKSIEIRLSEMPL
DNGMYVKADKINLDTDEIEFSYYHPKQ

Sequences:

>Translated_187_residues
MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSSKESLARFVNAYLKEKASNQLDYKVDINNDV
HVAGKIKAFSTSINAVVTFEPSVQENGDVMLKVTKFSLGELSLPISFVLNYMDSFYELPSFVHVHSGDKSIEIRLSEMPL
DNGMYVKADKINLDTDEIEFSYYHPKQ
>Mature_187_residues
MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSSKESLARFVNAYLKEKASNQLDYKVDINNDV
HVAGKIKAFSTSINAVVTFEPSVQENGDVMLKVTKFSLGELSLPISFVLNYMDSFYELPSFVHVHSGDKSIEIRLSEMPL
DNGMYVKADKINLDTDEIEFSYYHPKQ

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018672 [H]

Pfam domain/function: PF09911 DUF2140 [H]

EC number: NA

Molecular weight: Translated: 21107; Mature: 21107

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSSKESLARFVNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
YLKEKASNQLDYKVDINNDVHVAGKIKAFSTSINAVVTFEPSVQENGDVMLKVTKFSLGE
HHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCC
LSLPISFVLNYMDSFYELPSFVHVHSGDKSIEIRLSEMPLDNGMYVKADKINLDTDEIEF
CCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEE
SYYHPKQ
EEECCCC
>Mature Secondary Structure
MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSSKESLARFVNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
YLKEKASNQLDYKVDINNDVHVAGKIKAFSTSINAVVTFEPSVQENGDVMLKVTKFSLGE
HHHHHCCCCCEEEEECCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCEEEEEEEECCCC
LSLPISFVLNYMDSFYELPSFVHVHSGDKSIEIRLSEMPLDNGMYVKADKINLDTDEIEF
CCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCCEEE
SYYHPKQ
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]