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The map label for this gene is ykvN [H]

Identifier: 154685786

GI number: 154685786

Start: 1315624

End: 1315965

Strand: Reverse

Name: ykvN [H]

Synonym: RBAM_013530

Alternate gene names: 154685786

Gene position: 1315965-1315624 (Counterclockwise)

Preceding gene: 154685790

Following gene: 154685779

Centisome position: 33.58

GC content: 39.18

Gene sequence:

>342_bases
ATGAAAAAATTTAGCTGTGGGTTTGAAGTGACAAAGGAAGTTATTGGCGGAAAATGGAAAGGCCTTGTATTATACTTTTT
AATGAATGGACCAAAGAGAACGAGTGAATTAAAGCGCATGATCCCAAATATAACTCAGAAAATGCTGATTCAAACACTTA
GAGAGCTTGAAGCCAGTGGACTTGTGAGCAGAAAGATGTATAATCAAGTACCGCCGAAGGTTGAATATTCATCCACTGAA
CTTGGAGAATCTCTTAAACCTATCTTGCAGGAGCTCTGTCAATGGGGAAGCCATTATGCGGAGCAAGAGTATGCAGAAGG
TGAATATGAAATTGTACGTTAG

Upstream 100 bases:

>100_bases
CAAGATATAGTATCCTTCAGTAAGCACATTATCGGAAGTACCCACTTTTTTGTGATATAGTAACTAAAAAGTAATAAATG
TGGAATGGAGAGCTTTAGAC

Downstream 100 bases:

>100_bases
GATTGATGTAGCTGCTGAAGTAAATGCTAAACAACTTCAATACCATCGCCTAACAGATGAAGAACAGTCAGAAATAAATG
AGATATTCAATTTTGAAAGT

Product: YkvN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRMIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGSHYAEQEYAEGEYEIVR

Sequences:

>Translated_113_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRMIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGSHYAEQEYAEGEYEIVR
>Mature_113_residues
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRMIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTE
LGESLKPILQELCQWGSHYAEQEYAEGEYEIVR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=87, Percent_Identity=42.5287356321839, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13065; Mature: 13065

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRMIPNITQKMLIQTLRELEASG
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGSHYAEQEYAEGEYEIVR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRMIPNITQKMLIQTLRELEASG
CCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGSHYAEQEYAEGEYEIVR
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]