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The map label for this gene is 154685734

Identifier: 154685734

GI number: 154685734

Start: 1261949

End: 1263046

Strand: Reverse

Name: 154685734

Synonym: RBAM_013010

Alternate gene names: NA

Gene position: 1263046-1261949 (Counterclockwise)

Preceding gene: 154685735

Following gene: 154685729

Centisome position: 32.23

GC content: 53.28

Gene sequence:

>1098_bases
GTGTCACAGCCTAATTTGCCCAATATCACCCCTGTCGTTACACTTTCCAGAGACGATACCATTAACCTTCTTCTTTCGTC
AATTGCTATGGAAGAGCTGGGAATGGCACATATTCTGAATGCGGAAGGGGAAAAAATCCAATACGCGCTCGGAACGATTC
CCGGATTAACAGGGCCCCCGTCAAGTCTTGCGGATATTCTTAACCTGAATGAGAGCGTCCGTGATACGCTTGACAGCTTA
ATGAAACAGGAGCTTCTTCTCGGTTCAAAATTGGACAGTATCTCAAATATCCCTACACTGGCGGGACCGACTGGTGCTAC
GGGGCCGACGGGACCTACGGGAGCAGTCGGACCGGCCGGAGCGACGGGGCCAACCGGAGCGATCGGACCTACGGGGGCCA
CCGGTGCGGGTCTTCAAGGGATTGTTGCTTTTAATCCGCTGATTGCTCCCACTTACACAACCGGACAGGTTGTCTTGTAT
AACGGAAGCTCTTACGTCGCAAACGTAAACAGCCCGGCGGGAACCCCTGGAGCCTCAGCTGACTATACACTTTTAGCTGC
GGCGGGAATCACCGGCGTTACTGGCGACACCGGACCGACTGGAAGCACTGGCGCTACTGGAGTTACCGGACCGACCGGAA
GCACTGGCGCTACTGGCGGCACCGGACCGACCGGAAGCACCGGAACAAGTCTGACAGCAACTTCCGGCTATGCGAGCAAT
ACGGGCGGCGGTGTTGTCGCAGTTATTAACGGCGGCACGGCCATTCCCTTACCGAATGAACAAAACCTCTCAGCGGATAT
TACCGCTAATGCCGCAAATACTGTATTCACCGTTGCTCCGGCAGGACGGTACTATATTTCCTACCATATTAATTTAACGG
CCGGCCTGCTTGTAAGTTCGCGTATTTTAATCAACGGCACTCCTCCTGCAAGTTCGATTATCGCCCCGGTCGCGTCTTTG
GCAAACTTTAATAACTCCTTTATTGTGACTTTGCCAGCAGGCAGCACCATCCAGCTTCAGCTGTTCGGATTATTGGGTGC
GGCCACATTGCTCGGAGGAAGCGCCGGTGCAGCTTTAAACATTATTCGATTATCTTAA

Upstream 100 bases:

>100_bases
CAGAATCCGTGAATATAATGATACAGTACTGCTTACGCTCATTTCGGGGAATTTTGTTCGTAATAAAAAGATTTTCAGCC
AACTCATAAGGAGGGACATT

Downstream 100 bases:

>100_bases
TGGAACATGCAAGAAAAGGATCAGGCGTTTGTCCGCTGATCCTTTTTTAATTGAGACAGAAGCTCTTGTGCGGGTTTAAA
TTGAGGATTGAACTTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: Triple Helix Repeat-Containing Collagen; Collagen-Like Protein; BclA Protein; Collagen Triple Helix Repeat Protein; Collagen Triple Helix Repeat Domain-Containing Protein

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSQPNLPNITPVVTLSRDDTINLLLSSIAMEELGMAHILNAEGEKIQYALGTIPGLTGPPSSLADILNLNESVRDTLDSL
MKQELLLGSKLDSISNIPTLAGPTGATGPTGPTGAVGPAGATGPTGAIGPTGATGAGLQGIVAFNPLIAPTYTTGQVVLY
NGSSYVANVNSPAGTPGASADYTLLAAAGITGVTGDTGPTGSTGATGVTGPTGSTGATGGTGPTGSTGTSLTATSGYASN
TGGGVVAVINGGTAIPLPNEQNLSADITANAANTVFTVAPAGRYYISYHINLTAGLLVSSRILINGTPPASSIIAPVASL
ANFNNSFIVTLPAGSTIQLQLFGLLGAATLLGGSAGAALNIIRLS

Sequences:

>Translated_365_residues
MSQPNLPNITPVVTLSRDDTINLLLSSIAMEELGMAHILNAEGEKIQYALGTIPGLTGPPSSLADILNLNESVRDTLDSL
MKQELLLGSKLDSISNIPTLAGPTGATGPTGPTGAVGPAGATGPTGAIGPTGATGAGLQGIVAFNPLIAPTYTTGQVVLY
NGSSYVANVNSPAGTPGASADYTLLAAAGITGVTGDTGPTGSTGATGVTGPTGSTGATGGTGPTGSTGTSLTATSGYASN
TGGGVVAVINGGTAIPLPNEQNLSADITANAANTVFTVAPAGRYYISYHINLTAGLLVSSRILINGTPPASSIIAPVASL
ANFNNSFIVTLPAGSTIQLQLFGLLGAATLLGGSAGAALNIIRLS
>Mature_364_residues
SQPNLPNITPVVTLSRDDTINLLLSSIAMEELGMAHILNAEGEKIQYALGTIPGLTGPPSSLADILNLNESVRDTLDSLM
KQELLLGSKLDSISNIPTLAGPTGATGPTGPTGAVGPAGATGPTGAIGPTGATGAGLQGIVAFNPLIAPTYTTGQVVLYN
GSSYVANVNSPAGTPGASADYTLLAAAGITGVTGDTGPTGSTGATGVTGPTGSTGATGGTGPTGSTGTSLTATSGYASNT
GGGVVAVINGGTAIPLPNEQNLSADITANAANTVFTVAPAGRYYISYHINLTAGLLVSSRILINGTPPASSIIAPVASLA
NFNNSFIVTLPAGSTIQLQLFGLLGAATLLGGSAGAALNIIRLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35580; Mature: 35449

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPNLPNITPVVTLSRDDTINLLLSSIAMEELGMAHILNAEGEKIQYALGTIPGLTGPP
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCH
SSLADILNLNESVRDTLDSLMKQELLLGSKLDSISNIPTLAGPTGATGPTGPTGAVGPAG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ATGPTGAIGPTGATGAGLQGIVAFNPLIAPTYTTGQVVLYNGSSYVANVNSPAGTPGASA
CCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCC
DYTLLAAAGITGVTGDTGPTGSTGATGVTGPTGSTGATGGTGPTGSTGTSLTATSGYASN
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
TGGGVVAVINGGTAIPLPNEQNLSADITANAANTVFTVAPAGRYYISYHINLTAGLLVSS
CCCCEEEEECCCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEEEEEEEEEC
RILINGTPPASSIIAPVASLANFNNSFIVTLPAGSTIQLQLFGLLGAATLLGGSAGAALN
EEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEE
IIRLS
EEEEC
>Mature Secondary Structure 
SQPNLPNITPVVTLSRDDTINLLLSSIAMEELGMAHILNAEGEKIQYALGTIPGLTGPP
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCH
SSLADILNLNESVRDTLDSLMKQELLLGSKLDSISNIPTLAGPTGATGPTGPTGAVGPAG
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
ATGPTGAIGPTGATGAGLQGIVAFNPLIAPTYTTGQVVLYNGSSYVANVNSPAGTPGASA
CCCCCCCCCCCCCCCCCCCEEEEECCEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCC
DYTLLAAAGITGVTGDTGPTGSTGATGVTGPTGSTGATGGTGPTGSTGTSLTATSGYASN
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
TGGGVVAVINGGTAIPLPNEQNLSADITANAANTVFTVAPAGRYYISYHINLTAGLLVSS
CCCCEEEEECCCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEEEEEEEEEEEEEEC
RILINGTPPASSIIAPVASLANFNNSFIVTLPAGSTIQLQLFGLLGAATLLGGSAGAALN
EEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCEEE
IIRLS
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA