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The map label for this gene is ykaA [H]

Identifier: 154685703

GI number: 154685703

Start: 1230289

End: 1230906

Strand: Reverse

Name: ykaA [H]

Synonym: RBAM_012700

Alternate gene names: 154685703

Gene position: 1230906-1230289 (Counterclockwise)

Preceding gene: 154685704

Following gene: 154685702

Centisome position: 31.41

GC content: 39.16

Gene sequence:

>618_bases
ATGATAAAAAGAAAAAAAGATAAGTTCTCACTCCTTTTAACAGAAATCGCAAAAAACATAGACGAAACCGCAGAATATTT
TGTCAACTTTAAAGTGACGAACCAGACGACTTTAAAGGAATTTGCCGATACGTTAAAAGAGTTTGAAACAAAAGGAGATA
ATCATGTTCATGTCATGATTAAAGAGCTGAACAAAGCTTTTATCACTCCCATTGAACGTGAAGACATCCTTGAGCTGACA
AACAGCCTCGATGACGTGCTTGACGGAATCGAACATTTTTCAGCAATGATGGAGATTTTCTCGATCACTTCTTCCGATGA
GCATATCGATAAGTTCAGCGGATACATCAGAGAGTGCGCGAAGGAAATTTTAATCACGATTGAGCTGCTTGCAGAAAACC
GATTGAAGGACATTCACCCTCACGCCATTAAAATTAAGGAATACGAGCACAGCTGTGATAACCTGCACCGTAAATCATTA
AAAAATCTGTTCGGCACAGAAACCGATCCGATTAAAGTGATTCAGTACCGCGAGATTTACGAAACGCTTGAGGAAATTGC
CGACTCTTGCCAAAGCGTTGCCAATAACCTTGAAACCATTATTATGAAAAACGCGTAA

Upstream 100 bases:

>100_bases
CAAGTGGCGTTTTTTTCGACTTTATCTGTTTTTTTTCGACAAAAGGCTATATAATAATTTGATGTGTGCATTGTCTCATT
CAAACAATGGAGGGTTTTTA

Downstream 100 bases:

>100_bases
CGAGGGGTTATAATGGATACTCTATTACTTTTAACGATATTAATTGTCATATGCGCTTTGGTATTTGACTTCATTAACGG
ATTTCACGATACCGCAAACG

Product: YkaA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIKRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEFETKGDNHVHVMIKELNKAFITPIEREDILELT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIHPHAIKIKEYEHSCDNLHRKSL
KNLFGTETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA

Sequences:

>Translated_205_residues
MIKRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEFETKGDNHVHVMIKELNKAFITPIEREDILELT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIHPHAIKIKEYEHSCDNLHRKSL
KNLFGTETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA
>Mature_205_residues
MIKRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEFETKGDNHVHVMIKELNKAFITPIEREDILELT
NSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECAKEILITIELLAENRLKDIHPHAIKIKEYEHSCDNLHRKSL
KNLFGTETDPIKVIQYREIYETLEEIADSCQSVANNLETIIMKNA

Specific function: Unknown

COG id: COG1392

COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0111 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR018445 [H]

Pfam domain/function: PF01865 PhoU_div [H]

EC number: NA

Molecular weight: Translated: 23797; Mature: 23797

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEFETKGDNHVHVMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEHHH
KELNKAFITPIEREDILELTNSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KEILITIELLAENRLKDIHPHAIKIKEYEHSCDNLHRKSLKNLFGTETDPIKVIQYREIY
HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ETLEEIADSCQSVANNLETIIMKNA
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKRKKDKFSLLLTEIAKNIDETAEYFVNFKVTNQTTLKEFADTLKEFETKGDNHVHVMI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEHHH
KELNKAFITPIEREDILELTNSLDDVLDGIEHFSAMMEIFSITSSDEHIDKFSGYIRECA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KEILITIELLAENRLKDIHPHAIKIKEYEHSCDNLHRKSLKNLFGTETDPIKVIQYREIY
HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ETLEEIADSCQSVANNLETIIMKNA
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]