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The map label for this gene is yjoA [H]

Identifier: 154685677

GI number: 154685677

Start: 1215233

End: 1215700

Strand: Reverse

Name: yjoA [H]

Synonym: RBAM_012440

Alternate gene names: 154685677

Gene position: 1215700-1215233 (Counterclockwise)

Preceding gene: 154685681

Following gene: 154685676

Centisome position: 31.02

GC content: 45.73

Gene sequence:

>468_bases
ATGACAGCACAAAATCAGTTGGTCAGCCACTTTCTGTCACATCGAAACGTAACGATTGAGCTGGCGGAAAAAATCAGCCG
CGAACATTACGATTACAAGCCGGCAGAGACATCAATGTCCGCTCAGGAACTTGTAAAACACATGGTTTATTCTTTTCTTA
TGTTGGCAAACGTCATTAACGACGGAAACGCATCAGCCATCCAGAACAAACCGAAAGAAGAAGCAGAAACAGACCTCGTC
AAACTGGCTGAAACGTGTACTGAAAAAACGACAGACATCCTGTCACAGCTGACAGAAGAGCAGCTGAACCGCGAAATTGA
CCTGACCGCCTCTTTCGGCAGAAAAGTGACCGGCGCGGCTCTCCTTCAGCTTGCCATGGAGCATGAAATTCATCATAAAG
GCAATCTTTTCGTGTATGTCAGAGAAATGGGCCACACGGAACTTCCGTTTTATCAGCAAAAATCATAA

Upstream 100 bases:

>100_bases
ACGATTTATCTCCGTCACAAGCTTATTGCTTGTTTCTTCCGTGCCGTTGATATAGCATATCCTTGCAGCTTTTTATTCTG
TATTAAATGGGGGTTTTCAC

Downstream 100 bases:

>100_bases
TCCGGCCATCCGCCGGTCTGCGACATAACAGCAGGCTGGCGGATTTTTTGTTCTGTATAAAATTTTCCGAAAATTTAATT
GATTACCGCCTCTTAATCAT

Product: YjoA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVYSFLMLANVINDGNASAIQNKPKEEAETDLV
KLAETCTEKTTDILSQLTEEQLNREIDLTASFGRKVTGAALLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQKS

Sequences:

>Translated_155_residues
MTAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVYSFLMLANVINDGNASAIQNKPKEEAETDLV
KLAETCTEKTTDILSQLTEEQLNREIDLTASFGRKVTGAALLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQKS
>Mature_154_residues
TAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVYSFLMLANVINDGNASAIQNKPKEEAETDLVK
LAETCTEKTTDILSQLTEEQLNREIDLTASFGRKVTGAALLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQKS

Specific function: Unknown

COG id: COG2318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dinB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007837 [H]

Pfam domain/function: PF05163 DinB [H]

EC number: NA

Molecular weight: Translated: 17649; Mature: 17518

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVYSFLMLANVIN
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
DGNASAIQNKPKEEAETDLVKLAETCTEKTTDILSQLTEEQLNREIDLTASFGRKVTGAA
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHH
LLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQKS
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TAQNQLVSHFLSHRNVTIELAEKISREHYDYKPAETSMSAQELVKHMVYSFLMLANVIN
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
DGNASAIQNKPKEEAETDLVKLAETCTEKTTDILSQLTEEQLNREIDLTASFGRKVTGAA
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHH
LLQLAMEHEIHHKGNLFVYVREMGHTELPFYQQKS
HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]