Click here to switch to the map view.

The map label for this gene is yjqA [H]

Identifier: 154685681

GI number: 154685681

Start: 1218300

End: 1218677

Strand: Reverse

Name: yjqA [H]

Synonym: RBAM_012480

Alternate gene names: 154685681

Gene position: 1218677-1218300 (Counterclockwise)

Preceding gene: 154685683

Following gene: 154685677

Centisome position: 31.1

GC content: 44.44

Gene sequence:

>378_bases
ATGGGATTCATCAATGGATTGCTGGGCAATGCGTCGACAATATCGACGGCTGAAGCAAAAGCAGAACTGGCTCGTATTCT
GCTGGAAGGTGAGAATGTCAACGCCGCATTTAAGCTTGTCCGAGATATCATTGTCTTTACGGATAAGCGTCTTATTCTTG
TTGATAAACAGGGACTCACAGGGAAGAAAACGGAGATTCAATCCATTCCGTACAAGAGCATTTCCAGATTCAGCGTAGAA
ACCGCCGGCCGCTTTGACCTTGATTCAGAGCTGAAAATTTGGATTTCAGGCGCGGAACTTCCCGCTGTCTCAAAGCAGTT
TAAAAAAGATGAAAGCATTTATGATATTCAAAAGGCCCTTGCCGCAGTTTGTATGTAA

Upstream 100 bases:

>100_bases
CTCTCCTTTTCCAGTCAGCACCAGTTTACTCTACTCATCTGGGAATGGAAACCTTTTTATAGTATGATTTGATAGAATAC
GTATCAGGGGGGGATATATC

Downstream 100 bases:

>100_bases
GAAGAAACGGAAGCCCGGGGAGCTTCCGTTTTATTGATTACAGTTTTTCTTCAATTTTCGCCTTCGTTTTCGGGCCGTAA
ATTCCGTCTGCCGTTAACCC

Product: YjqA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKRLILVDKQGLTGKKTEIQSIPYKSISRFSVE
TAGRFDLDSELKIWISGAELPAVSKQFKKDESIYDIQKALAAVCM

Sequences:

>Translated_125_residues
MGFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKRLILVDKQGLTGKKTEIQSIPYKSISRFSVE
TAGRFDLDSELKIWISGAELPAVSKQFKKDESIYDIQKALAAVCM
>Mature_124_residues
GFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKRLILVDKQGLTGKKTEIQSIPYKSISRFSVET
AGRFDLDSELKIWISGAELPAVSKQFKKDESIYDIQKALAAVCM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012544 [H]

Pfam domain/function: PF08000 DUF1696 [H]

EC number: NA

Molecular weight: Translated: 13723; Mature: 13592

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKRLILVDKQGLT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
GKKTEIQSIPYKSISRFSVETAGRFDLDSELKIWISGAELPAVSKQFKKDESIYDIQKAL
CCCCHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHH
AAVCM
HHHCC
>Mature Secondary Structure 
GFINGLLGNASTISTAEAKAELARILLEGENVNAAFKLVRDIIVFTDKRLILVDKQGLT
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
GKKTEIQSIPYKSISRFSVETAGRFDLDSELKIWISGAELPAVSKQFKKDESIYDIQKAL
CCCCHHCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHH
AAVCM
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]