Click here to switch to the map view.

The map label for this gene is ygzB

Identifier: 154685337

GI number: 154685337

Start: 874507

End: 874860

Strand: Reverse

Name: ygzB

Synonym: RBAM_008830

Alternate gene names: NA

Gene position: 874860-874507 (Counterclockwise)

Preceding gene: 154685342

Following gene: 154685334

Centisome position: 22.33

GC content: 44.92

Gene sequence:

>354_bases
ATGGCGAAATACTCAAGCAAAATTAATAAGATCAGAACGTTTGCGTTAAGTTTGGTTTTCGTTGGGTTTATCATTATGTA
CATCGGGCTGTTCTTCAAGCAGTCTGTTTTGCTTGCCAGCTTGTTTATGATTCTCGGCCTGCTGTCGATCGGGCTCAGCA
CCGCCGTTTATTTTTGGATCGGCATGCTGTCCACAAAAGCGGTCCGGGTGATGTGCCCCGCTTGCGAGAAAGAAACGAAG
ATTCTGGGCAGAGTGGATATGTGCATGCATTGCAGAGAGCCGCTCACATTGGATAAAGGATTGGAAGGCAAAGCGTTCGA
TGAGTCTTATAACAGAAAAAACAGTGTAAAATAA

Upstream 100 bases:

>100_bases
ATTTCCTTTCAGGTGCCATATTTATTCTTCCCTTTTCTTACGAAAACATGAAGAATATGCCATCTGTTTTGTGCTATAGT
TAAACGAGAGGGGGATGGAC

Downstream 100 bases:

>100_bases
ACGAAGCTGACCGTATCAAAGCGGTCAGCTTCGTTTAGTGGTTTTCTTTTTTGGAACATTCTTGGCAGACGCCGTAAATC
TCCAAACGGTGGTGGCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSIGLSTAVYFWIGMLSTKAVRVMCPACEKETK
ILGRVDMCMHCREPLTLDKGLEGKAFDESYNRKNSVK

Sequences:

>Translated_117_residues
MAKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSIGLSTAVYFWIGMLSTKAVRVMCPACEKETK
ILGRVDMCMHCREPLTLDKGLEGKAFDESYNRKNSVK
>Mature_116_residues
AKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSIGLSTAVYFWIGMLSTKAVRVMCPACEKETKI
LGRVDMCMHCREPLTLDKGLEGKAFDESYNRKNSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0295 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y883_BACA2 (A7Z2P1)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001420498.1
- ProteinModelPortal:   A7Z2P1
- EnsemblBacteria:   EBBACT00000007256
- GeneID:   5460389
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_008830
- eggNOG:   NOG39729
- GeneTree:   EBGT00050000002851
- HOGENOM:   HBG313996
- OMA:   KYSSKIN
- ProtClustDB:   PRK02935
- BioCyc:   BAMY326423:RBAM_008830-MONOMER
- HAMAP:   MF_01502
- InterPro:   IPR020912
- ProDom:   PD355753

Pfam domain/function: PF11023 DUF2614

EC number: NA

Molecular weight: Translated: 13188; Mature: 13057

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe7df07c)-; HASH(0xe9468e8)-;

Cys/Met content:

3.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSIGLSTAVYFWI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLSTKAVRVMCPACEKETKILGRVDMCMHCREPLTLDKGLEGKAFDESYNRKNSVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCH
>Mature Secondary Structure 
AKYSSKINKIRTFALSLVFVGFIIMYIGLFFKQSVLLASLFMILGLLSIGLSTAVYFWI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GMLSTKAVRVMCPACEKETKILGRVDMCMHCREPLTLDKGLEGKAFDESYNRKNSVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA